Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
LRCH1Q9Y2L9 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.01■□□□□ 0.95
LRCH1Q9Y2L9 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.01■□□□□ 0.95
LRCH1Q9Y2L9 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRCH1Q9Y2L9 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRCH1Q9Y2L9 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.01■□□□□ 0.95
LRCH1Q9Y2L9 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
LRCH1Q9Y2L9 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.01■□□□□ 0.95
LRCH1Q9Y2L9 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRCH1Q9Y2L9 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
LRCH1Q9Y2L9 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
LRCH1Q9Y2L9 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21■□□□□ 0.95
LRCH1Q9Y2L9 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21■□□□□ 0.95
LRCH1Q9Y2L9 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21■□□□□ 0.95
LRCH1Q9Y2L9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21■□□□□ 0.95
LRCH1Q9Y2L9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
LRCH1Q9Y2L9 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
LRCH1Q9Y2L9 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
LRCH1Q9Y2L9 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LRCH1Q9Y2L9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRCH1Q9Y2L9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LRCH1Q9Y2L9 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
LRCH1Q9Y2L9 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
LRCH1Q9Y2L9 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
LRCH1Q9Y2L9 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.99■□□□□ 0.95
LRCH1Q9Y2L9 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
LRCH1Q9Y2L9 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LRCH1Q9Y2L9 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.98■□□□□ 0.95
LRCH1Q9Y2L9 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRCH1Q9Y2L9 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRCH1Q9Y2L9 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.98■□□□□ 0.95
LRCH1Q9Y2L9 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.98■□□□□ 0.95
LRCH1Q9Y2L9 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
LRCH1Q9Y2L9 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRCH1Q9Y2L9 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
LRCH1Q9Y2L9 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRCH1Q9Y2L9 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.97■□□□□ 0.95
LRCH1Q9Y2L9 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRCH1Q9Y2L9 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.97■□□□□ 0.95
LRCH1Q9Y2L9 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
LRCH1Q9Y2L9 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRCH1Q9Y2L9 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRCH1Q9Y2L9 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRCH1Q9Y2L9 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.97■□□□□ 0.95
LRCH1Q9Y2L9 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRCH1Q9Y2L9 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.97■□□□□ 0.95
LRCH1Q9Y2L9 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
LRCH1Q9Y2L9 AC010542.4-201ENST00000563151 1910 ntBASIC20.97■□□□□ 0.95
LRCH1Q9Y2L9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRCH1Q9Y2L9 MIR219A2-201ENST00000608502 1504 ntBASIC20.97■□□□□ 0.95
LRCH1Q9Y2L9 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRCH1Q9Y2L9 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.97■□□□□ 0.95
LRCH1Q9Y2L9 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRCH1Q9Y2L9 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRCH1Q9Y2L9 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRCH1Q9Y2L9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRCH1Q9Y2L9 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
LRCH1Q9Y2L9 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRCH1Q9Y2L9 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.96■□□□□ 0.95
LRCH1Q9Y2L9 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
LRCH1Q9Y2L9 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
LRCH1Q9Y2L9 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRCH1Q9Y2L9 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.96■□□□□ 0.95
LRCH1Q9Y2L9 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRCH1Q9Y2L9 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LRCH1Q9Y2L9 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
LRCH1Q9Y2L9 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRCH1Q9Y2L9 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRCH1Q9Y2L9 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
LRCH1Q9Y2L9 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
LRCH1Q9Y2L9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.95■□□□□ 0.94
LRCH1Q9Y2L9 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
LRCH1Q9Y2L9 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.95■□□□□ 0.94
LRCH1Q9Y2L9 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRCH1Q9Y2L9 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRCH1Q9Y2L9 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.95■□□□□ 0.94
LRCH1Q9Y2L9 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRCH1Q9Y2L9 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRCH1Q9Y2L9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.95■□□□□ 0.94
LRCH1Q9Y2L9 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.95■□□□□ 0.94
LRCH1Q9Y2L9 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.95■□□□□ 0.94
LRCH1Q9Y2L9 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRCH1Q9Y2L9 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRCH1Q9Y2L9 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
LRCH1Q9Y2L9 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.94■□□□□ 0.94
LRCH1Q9Y2L9 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRCH1Q9Y2L9 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
LRCH1Q9Y2L9 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.94■□□□□ 0.94
LRCH1Q9Y2L9 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRCH1Q9Y2L9 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRCH1Q9Y2L9 GPX1-201ENST00000419349 1106 ntBASIC20.94■□□□□ 0.94
LRCH1Q9Y2L9 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LRCH1Q9Y2L9 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.94■□□□□ 0.94
LRCH1Q9Y2L9 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
LRCH1Q9Y2L9 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRCH1Q9Y2L9 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRCH1Q9Y2L9 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
LRCH1Q9Y2L9 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRCH1Q9Y2L9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRCH1Q9Y2L9 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms