Protein–RNA interactions for Protein: Q9UPE1

SRPK3, SRSF protein kinase 3, humanhuman

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK3Q9UPE1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.96■□□□□ 0.95
SRPK3Q9UPE1 MIR5787-201ENST00000611784 55 ntBASIC20.96■□□□□ 0.95
SRPK3Q9UPE1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SRPK3Q9UPE1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.96■□□□□ 0.95
SRPK3Q9UPE1 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SRPK3Q9UPE1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
SRPK3Q9UPE1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SRPK3Q9UPE1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SRPK3Q9UPE1 MIR572-201ENST00000384983 95 ntBASIC20.95■□□□□ 0.94
SRPK3Q9UPE1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SRPK3Q9UPE1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SRPK3Q9UPE1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.95■□□□□ 0.94
SRPK3Q9UPE1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.95■□□□□ 0.94
SRPK3Q9UPE1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SRPK3Q9UPE1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SRPK3Q9UPE1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SRPK3Q9UPE1 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRPK3Q9UPE1 AC004687.1-201ENST00000579003 1625 ntBASIC20.94■□□□□ 0.94
SRPK3Q9UPE1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRPK3Q9UPE1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRPK3Q9UPE1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRPK3Q9UPE1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SRPK3Q9UPE1 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.94■□□□□ 0.94
SRPK3Q9UPE1 AC097381.1-201ENST00000429019 1296 ntBASIC20.94■□□□□ 0.94
SRPK3Q9UPE1 MIR6821-201ENST00000617625 74 ntBASIC20.94■□□□□ 0.94
SRPK3Q9UPE1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.94■□□□□ 0.94
SRPK3Q9UPE1 AL358852.1-201ENST00000623174 1268 ntBASIC20.94■□□□□ 0.94
SRPK3Q9UPE1 AC068587.7-201ENST00000641602 218 ntBASIC20.94■□□□□ 0.94
SRPK3Q9UPE1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SRPK3Q9UPE1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.94■□□□□ 0.94
SRPK3Q9UPE1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.94■□□□□ 0.94
SRPK3Q9UPE1 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.94■□□□□ 0.94
SRPK3Q9UPE1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SRPK3Q9UPE1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SRPK3Q9UPE1 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRPK3Q9UPE1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SRPK3Q9UPE1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.93■□□□□ 0.94
SRPK3Q9UPE1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.93■□□□□ 0.94
SRPK3Q9UPE1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.93■□□□□ 0.94
SRPK3Q9UPE1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SRPK3Q9UPE1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRPK3Q9UPE1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SRPK3Q9UPE1 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRPK3Q9UPE1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRPK3Q9UPE1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SRPK3Q9UPE1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
SRPK3Q9UPE1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.92■□□□□ 0.94
SRPK3Q9UPE1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.92■□□□□ 0.94
SRPK3Q9UPE1 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRPK3Q9UPE1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRPK3Q9UPE1 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRPK3Q9UPE1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRPK3Q9UPE1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.92■□□□□ 0.94
SRPK3Q9UPE1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRPK3Q9UPE1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SRPK3Q9UPE1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRPK3Q9UPE1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRPK3Q9UPE1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRPK3Q9UPE1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.92■□□□□ 0.94
SRPK3Q9UPE1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.92■□□□□ 0.94
SRPK3Q9UPE1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.92■□□□□ 0.94
SRPK3Q9UPE1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
SRPK3Q9UPE1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRPK3Q9UPE1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.92■□□□□ 0.94
SRPK3Q9UPE1 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRPK3Q9UPE1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SRPK3Q9UPE1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.92■□□□□ 0.94
SRPK3Q9UPE1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRPK3Q9UPE1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRPK3Q9UPE1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.91■□□□□ 0.94
SRPK3Q9UPE1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.91■□□□□ 0.94
SRPK3Q9UPE1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.91■□□□□ 0.94
SRPK3Q9UPE1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.91■□□□□ 0.94
SRPK3Q9UPE1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.91■□□□□ 0.94
SRPK3Q9UPE1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRPK3Q9UPE1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.91■□□□□ 0.94
SRPK3Q9UPE1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.91■□□□□ 0.94
SRPK3Q9UPE1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SRPK3Q9UPE1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.9■□□□□ 0.94
SRPK3Q9UPE1 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SRPK3Q9UPE1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SRPK3Q9UPE1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SRPK3Q9UPE1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.9■□□□□ 0.94
SRPK3Q9UPE1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.9■□□□□ 0.94
SRPK3Q9UPE1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.9■□□□□ 0.94
SRPK3Q9UPE1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.9■□□□□ 0.94
SRPK3Q9UPE1 AL354811.1-201ENST00000610286 706 ntBASIC20.9■□□□□ 0.94
SRPK3Q9UPE1 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SRPK3Q9UPE1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.9■□□□□ 0.94
SRPK3Q9UPE1 AC092068.2-201ENST00000590491 1708 ntBASIC20.9■□□□□ 0.94
SRPK3Q9UPE1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.89■□□□□ 0.94
SRPK3Q9UPE1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
SRPK3Q9UPE1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.89■□□□□ 0.93
SRPK3Q9UPE1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.89■□□□□ 0.93
SRPK3Q9UPE1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.89■□□□□ 0.93
SRPK3Q9UPE1 AC012414.1-201ENST00000556676 535 ntBASIC20.89■□□□□ 0.93
SRPK3Q9UPE1 AC087239.1-201ENST00000622671 572 ntBASIC20.89■□□□□ 0.93
SRPK3Q9UPE1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SRPK3Q9UPE1 ANOS2P-203ENST00000472227 1816 ntBASIC20.89■□□□□ 0.93
SRPK3Q9UPE1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms