Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PCDHGB4Q9UN71 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDHGB4Q9UN71 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHGB4Q9UN71 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGB4Q9UN71 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHGB4Q9UN71 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGB4Q9UN71 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGB4Q9UN71 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGB4Q9UN71 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGB4Q9UN71 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGB4Q9UN71 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGB4Q9UN71 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGB4Q9UN71 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
PCDHGB4Q9UN71 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGB4Q9UN71 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGB4Q9UN71 YBX1P4-201ENST00000392794 808 ntBASIC21.35■■□□□ 1.01
PCDHGB4Q9UN71 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHGB4Q9UN71 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.35■■□□□ 1.01
PCDHGB4Q9UN71 AL033527.3-201ENST00000566366 1196 ntBASIC21.35■■□□□ 1.01
PCDHGB4Q9UN71 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHGB4Q9UN71 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGB4Q9UN71 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
PCDHGB4Q9UN71 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGB4Q9UN71 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGB4Q9UN71 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDHGB4Q9UN71 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGB4Q9UN71 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGB4Q9UN71 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
PCDHGB4Q9UN71 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGB4Q9UN71 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.34■■□□□ 1.01
PCDHGB4Q9UN71 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDHGB4Q9UN71 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.33■■□□□ 1.01
PCDHGB4Q9UN71 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHGB4Q9UN71 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
PCDHGB4Q9UN71 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
PCDHGB4Q9UN71 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1
PCDHGB4Q9UN71 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PCDHGB4Q9UN71 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1
PCDHGB4Q9UN71 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGB4Q9UN71 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.32■■□□□ 1
PCDHGB4Q9UN71 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGB4Q9UN71 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.32■■□□□ 1
PCDHGB4Q9UN71 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.32■■□□□ 1
PCDHGB4Q9UN71 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGB4Q9UN71 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGB4Q9UN71 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGB4Q9UN71 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGB4Q9UN71 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGB4Q9UN71 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGB4Q9UN71 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.31■■□□□ 1
PCDHGB4Q9UN71 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
PCDHGB4Q9UN71 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
PCDHGB4Q9UN71 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGB4Q9UN71 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGB4Q9UN71 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
PCDHGB4Q9UN71 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.31■■□□□ 1
PCDHGB4Q9UN71 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.31■■□□□ 1
PCDHGB4Q9UN71 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.31■■□□□ 1
PCDHGB4Q9UN71 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGB4Q9UN71 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHGB4Q9UN71 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHGB4Q9UN71 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHGB4Q9UN71 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHGB4Q9UN71 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHGB4Q9UN71 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHGB4Q9UN71 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.3■■□□□ 1
PCDHGB4Q9UN71 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.3■■□□□ 1
PCDHGB4Q9UN71 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.29■■□□□ 1
PCDHGB4Q9UN71 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGB4Q9UN71 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGB4Q9UN71 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGB4Q9UN71 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.29■■□□□ 1
PCDHGB4Q9UN71 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGB4Q9UN71 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHGB4Q9UN71 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGB4Q9UN71 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.29■■□□□ 1
PCDHGB4Q9UN71 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
PCDHGB4Q9UN71 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHGB4Q9UN71 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.28■■□□□ 1
PCDHGB4Q9UN71 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.28■■□□□ 1
PCDHGB4Q9UN71 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.28■■□□□ 1
PCDHGB4Q9UN71 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PCDHGB4Q9UN71 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGB4Q9UN71 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGB4Q9UN71 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.28■■□□□ 1
PCDHGB4Q9UN71 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.28■■□□□ 1
PCDHGB4Q9UN71 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHGB4Q9UN71 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.28■■□□□ 1
PCDHGB4Q9UN71 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGB4Q9UN71 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.28■■□□□ 1
PCDHGB4Q9UN71 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGB4Q9UN71 KRT8P33-201ENST00000508125 1423 ntBASIC21.28■■□□□ 1
PCDHGB4Q9UN71 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.28■■□□□ 1
PCDHGB4Q9UN71 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGB4Q9UN71 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHGB4Q9UN71 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGB4Q9UN71 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDHGB4Q9UN71 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHGB4Q9UN71 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
PCDHGB4Q9UN71 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms