Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NOTCH3Q9UM47 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NOTCH3Q9UM47 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NOTCH3Q9UM47 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NOTCH3Q9UM47 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NOTCH3Q9UM47 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC16.98■□□□□ 0.31
NOTCH3Q9UM47 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NOTCH3Q9UM47 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.98■□□□□ 0.31
NOTCH3Q9UM47 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NOTCH3Q9UM47 AC141586.4-201ENST00000624558 1573 ntBASIC16.98■□□□□ 0.31
NOTCH3Q9UM47 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.98■□□□□ 0.31
NOTCH3Q9UM47 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NOTCH3Q9UM47 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.97■□□□□ 0.31
NOTCH3Q9UM47 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NOTCH3Q9UM47 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NOTCH3Q9UM47 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC16.97■□□□□ 0.31
NOTCH3Q9UM47 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NOTCH3Q9UM47 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NOTCH3Q9UM47 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
NOTCH3Q9UM47 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NOTCH3Q9UM47 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NOTCH3Q9UM47 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.97■□□□□ 0.31
NOTCH3Q9UM47 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NOTCH3Q9UM47 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.97■□□□□ 0.31
NOTCH3Q9UM47 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC16.97■□□□□ 0.31
NOTCH3Q9UM47 AC145676.1-201ENST00000514988 2004 ntBASIC16.97■□□□□ 0.31
NOTCH3Q9UM47 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.97■□□□□ 0.31
NOTCH3Q9UM47 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.97■□□□□ 0.31
NOTCH3Q9UM47 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NOTCH3Q9UM47 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NOTCH3Q9UM47 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC16.96■□□□□ 0.31
NOTCH3Q9UM47 AC133637.1-201ENST00000624115 1537 ntBASIC16.96■□□□□ 0.31
NOTCH3Q9UM47 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NOTCH3Q9UM47 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NOTCH3Q9UM47 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
NOTCH3Q9UM47 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NOTCH3Q9UM47 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.96■□□□□ 0.31
NOTCH3Q9UM47 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.96■□□□□ 0.31
NOTCH3Q9UM47 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.96■□□□□ 0.31
NOTCH3Q9UM47 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.96■□□□□ 0.31
NOTCH3Q9UM47 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
NOTCH3Q9UM47 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NOTCH3Q9UM47 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.96■□□□□ 0.3
NOTCH3Q9UM47 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
NOTCH3Q9UM47 AP005435.1-201ENST00000529293 1178 ntBASIC16.96■□□□□ 0.3
NOTCH3Q9UM47 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.96■□□□□ 0.3
NOTCH3Q9UM47 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.96■□□□□ 0.3
NOTCH3Q9UM47 ALDH1A3-203ENST00000557963 1670 ntBASIC16.96■□□□□ 0.3
NOTCH3Q9UM47 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC16.95■□□□□ 0.3
NOTCH3Q9UM47 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC16.95■□□□□ 0.3
NOTCH3Q9UM47 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NOTCH3Q9UM47 AC016769.1-201ENST00000409132 1010 ntBASIC16.95■□□□□ 0.3
NOTCH3Q9UM47 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
NOTCH3Q9UM47 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.95■□□□□ 0.3
NOTCH3Q9UM47 AL354811.1-201ENST00000610286 706 ntBASIC16.95■□□□□ 0.3
NOTCH3Q9UM47 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NOTCH3Q9UM47 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NOTCH3Q9UM47 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NOTCH3Q9UM47 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NOTCH3Q9UM47 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NOTCH3Q9UM47 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.95■□□□□ 0.3
NOTCH3Q9UM47 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NOTCH3Q9UM47 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.95■□□□□ 0.3
NOTCH3Q9UM47 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.95■□□□□ 0.3
NOTCH3Q9UM47 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC16.95■□□□□ 0.3
NOTCH3Q9UM47 AC010525.1-201ENST00000585559 441 ntBASIC16.95■□□□□ 0.3
NOTCH3Q9UM47 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
NOTCH3Q9UM47 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
NOTCH3Q9UM47 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NOTCH3Q9UM47 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC16.94■□□□□ 0.3
NOTCH3Q9UM47 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NOTCH3Q9UM47 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NOTCH3Q9UM47 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NOTCH3Q9UM47 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
NOTCH3Q9UM47 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NOTCH3Q9UM47 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.94■□□□□ 0.3
NOTCH3Q9UM47 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NOTCH3Q9UM47 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NOTCH3Q9UM47 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NOTCH3Q9UM47 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
NOTCH3Q9UM47 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
NOTCH3Q9UM47 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
NOTCH3Q9UM47 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NOTCH3Q9UM47 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
NOTCH3Q9UM47 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NOTCH3Q9UM47 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC16.93■□□□□ 0.3
NOTCH3Q9UM47 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC16.93■□□□□ 0.3
NOTCH3Q9UM47 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC16.93■□□□□ 0.3
NOTCH3Q9UM47 KRT18P61-201ENST00000585825 1298 ntBASIC16.93■□□□□ 0.3
NOTCH3Q9UM47 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
NOTCH3Q9UM47 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC16.93■□□□□ 0.3
NOTCH3Q9UM47 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
NOTCH3Q9UM47 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
NOTCH3Q9UM47 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NOTCH3Q9UM47 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC16.93■□□□□ 0.3
NOTCH3Q9UM47 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NOTCH3Q9UM47 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC16.93■□□□□ 0.3
NOTCH3Q9UM47 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NOTCH3Q9UM47 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NOTCH3Q9UM47 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms