Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SPHK1Q9NYA1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
SPHK1Q9NYA1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SPHK1Q9NYA1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SPHK1Q9NYA1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SPHK1Q9NYA1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SPHK1Q9NYA1 DUSP8P3-201ENST00000399571 1760 ntBASIC21.38■■□□□ 1.01
SPHK1Q9NYA1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.38■■□□□ 1.01
SPHK1Q9NYA1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
SPHK1Q9NYA1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SPHK1Q9NYA1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.38■■□□□ 1.01
SPHK1Q9NYA1 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SPHK1Q9NYA1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
SPHK1Q9NYA1 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SPHK1Q9NYA1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SPHK1Q9NYA1 SLC47A1P1-202ENST00000449666 945 ntBASIC21.38■■□□□ 1.01
SPHK1Q9NYA1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.38■■□□□ 1.01
SPHK1Q9NYA1 AC010525.1-201ENST00000585559 441 ntBASIC21.38■■□□□ 1.01
SPHK1Q9NYA1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.38■■□□□ 1.01
SPHK1Q9NYA1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.38■■□□□ 1.01
SPHK1Q9NYA1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SPHK1Q9NYA1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
SPHK1Q9NYA1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SPHK1Q9NYA1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.37■■□□□ 1.01
SPHK1Q9NYA1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SPHK1Q9NYA1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.37■■□□□ 1.01
SPHK1Q9NYA1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
SPHK1Q9NYA1 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.37■■□□□ 1.01
SPHK1Q9NYA1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.37■■□□□ 1.01
SPHK1Q9NYA1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SPHK1Q9NYA1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SPHK1Q9NYA1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SPHK1Q9NYA1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SPHK1Q9NYA1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SPHK1Q9NYA1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
SPHK1Q9NYA1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
SPHK1Q9NYA1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SPHK1Q9NYA1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SPHK1Q9NYA1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.36■■□□□ 1.01
SPHK1Q9NYA1 AC099791.1-201ENST00000416440 715 ntBASIC21.36■■□□□ 1.01
SPHK1Q9NYA1 BX842568.3-201ENST00000418104 571 ntBASIC21.36■■□□□ 1.01
SPHK1Q9NYA1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
SPHK1Q9NYA1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.36■■□□□ 1.01
SPHK1Q9NYA1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
SPHK1Q9NYA1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.36■■□□□ 1.01
SPHK1Q9NYA1 AC233992.3-201ENST00000607491 485 ntBASIC21.36■■□□□ 1.01
SPHK1Q9NYA1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SPHK1Q9NYA1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SPHK1Q9NYA1 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SPHK1Q9NYA1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.36■■□□□ 1.01
SPHK1Q9NYA1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.35■■□□□ 1.01
SPHK1Q9NYA1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SPHK1Q9NYA1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SPHK1Q9NYA1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SPHK1Q9NYA1 AC027682.1-201ENST00000562846 899 ntBASIC21.35■■□□□ 1.01
SPHK1Q9NYA1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SPHK1Q9NYA1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SPHK1Q9NYA1 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SPHK1Q9NYA1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SPHK1Q9NYA1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SPHK1Q9NYA1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
SPHK1Q9NYA1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
SPHK1Q9NYA1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SPHK1Q9NYA1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SPHK1Q9NYA1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.34■■□□□ 1.01
SPHK1Q9NYA1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SPHK1Q9NYA1 AC091305.1-201ENST00000479476 895 ntBASIC21.34■■□□□ 1.01
SPHK1Q9NYA1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
SPHK1Q9NYA1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
SPHK1Q9NYA1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SPHK1Q9NYA1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
SPHK1Q9NYA1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
SPHK1Q9NYA1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SPHK1Q9NYA1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
SPHK1Q9NYA1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SPHK1Q9NYA1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.33■■□□□ 1.01
SPHK1Q9NYA1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
SPHK1Q9NYA1 OR2I1P-207ENST00000453522 948 ntBASIC21.33■■□□□ 1.01
SPHK1Q9NYA1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.33■■□□□ 1.01
SPHK1Q9NYA1 CA15P2-201ENST00000611168 834 ntBASIC21.33■■□□□ 1.01
SPHK1Q9NYA1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SPHK1Q9NYA1 RASA4CP-201ENST00000424092 1398 ntBASIC21.33■■□□□ 1
SPHK1Q9NYA1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SPHK1Q9NYA1 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.32■■□□□ 1
SPHK1Q9NYA1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.32■■□□□ 1
SPHK1Q9NYA1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SPHK1Q9NYA1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SPHK1Q9NYA1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.32■■□□□ 1
SPHK1Q9NYA1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.32■■□□□ 1
SPHK1Q9NYA1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.32■■□□□ 1
SPHK1Q9NYA1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SPHK1Q9NYA1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.32■■□□□ 1
SPHK1Q9NYA1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.32■■□□□ 1
SPHK1Q9NYA1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SPHK1Q9NYA1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.31■■□□□ 1
SPHK1Q9NYA1 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SPHK1Q9NYA1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SPHK1Q9NYA1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
SPHK1Q9NYA1 DUSP8P5-201ENST00000422884 1815 ntBASIC21.3■■□□□ 1
SPHK1Q9NYA1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms