Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
ZCCHC3Q9NUD5 GUSBP5-201ENST00000418136 578 ntBASIC20.77■□□□□ 0.92
ZCCHC3Q9NUD5 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.77■□□□□ 0.92
ZCCHC3Q9NUD5 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.77■□□□□ 0.92
ZCCHC3Q9NUD5 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
ZCCHC3Q9NUD5 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZCCHC3Q9NUD5 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.77■□□□□ 0.92
ZCCHC3Q9NUD5 ESRRAP2-201ENST00000418437 1549 ntBASIC20.77■□□□□ 0.92
ZCCHC3Q9NUD5 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ZCCHC3Q9NUD5 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
ZCCHC3Q9NUD5 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ZCCHC3Q9NUD5 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZCCHC3Q9NUD5 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
ZCCHC3Q9NUD5 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ZCCHC3Q9NUD5 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZCCHC3Q9NUD5 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZCCHC3Q9NUD5 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZCCHC3Q9NUD5 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZCCHC3Q9NUD5 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
ZCCHC3Q9NUD5 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
ZCCHC3Q9NUD5 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.76■□□□□ 0.91
ZCCHC3Q9NUD5 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.76■□□□□ 0.91
ZCCHC3Q9NUD5 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.76■□□□□ 0.91
ZCCHC3Q9NUD5 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.76■□□□□ 0.91
ZCCHC3Q9NUD5 AC009086.3-201ENST00000623486 1008 ntBASIC20.76■□□□□ 0.91
ZCCHC3Q9NUD5 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.76■□□□□ 0.91
ZCCHC3Q9NUD5 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZCCHC3Q9NUD5 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZCCHC3Q9NUD5 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZCCHC3Q9NUD5 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.76■□□□□ 0.91
ZCCHC3Q9NUD5 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZCCHC3Q9NUD5 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZCCHC3Q9NUD5 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZCCHC3Q9NUD5 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZCCHC3Q9NUD5 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZCCHC3Q9NUD5 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.75■□□□□ 0.91
ZCCHC3Q9NUD5 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.75■□□□□ 0.91
ZCCHC3Q9NUD5 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.75■□□□□ 0.91
ZCCHC3Q9NUD5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.75■□□□□ 0.91
ZCCHC3Q9NUD5 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZCCHC3Q9NUD5 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.75■□□□□ 0.91
ZCCHC3Q9NUD5 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZCCHC3Q9NUD5 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZCCHC3Q9NUD5 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
ZCCHC3Q9NUD5 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
ZCCHC3Q9NUD5 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.74■□□□□ 0.91
ZCCHC3Q9NUD5 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZCCHC3Q9NUD5 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZCCHC3Q9NUD5 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZCCHC3Q9NUD5 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZCCHC3Q9NUD5 AL117332.1-201ENST00000622628 974 ntBASIC20.74■□□□□ 0.91
ZCCHC3Q9NUD5 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
ZCCHC3Q9NUD5 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZCCHC3Q9NUD5 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZCCHC3Q9NUD5 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.74■□□□□ 0.91
ZCCHC3Q9NUD5 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZCCHC3Q9NUD5 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZCCHC3Q9NUD5 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZCCHC3Q9NUD5 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.73■□□□□ 0.91
ZCCHC3Q9NUD5 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.73■□□□□ 0.91
ZCCHC3Q9NUD5 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.73■□□□□ 0.91
ZCCHC3Q9NUD5 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZCCHC3Q9NUD5 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.73■□□□□ 0.91
ZCCHC3Q9NUD5 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZCCHC3Q9NUD5 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
ZCCHC3Q9NUD5 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZCCHC3Q9NUD5 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
ZCCHC3Q9NUD5 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZCCHC3Q9NUD5 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZCCHC3Q9NUD5 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.72■□□□□ 0.91
ZCCHC3Q9NUD5 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
ZCCHC3Q9NUD5 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZCCHC3Q9NUD5 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZCCHC3Q9NUD5 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZCCHC3Q9NUD5 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
ZCCHC3Q9NUD5 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.71■□□□□ 0.91
ZCCHC3Q9NUD5 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZCCHC3Q9NUD5 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZCCHC3Q9NUD5 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZCCHC3Q9NUD5 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.71■□□□□ 0.91
ZCCHC3Q9NUD5 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZCCHC3Q9NUD5 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
ZCCHC3Q9NUD5 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZCCHC3Q9NUD5 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZCCHC3Q9NUD5 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ZCCHC3Q9NUD5 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ZCCHC3Q9NUD5 EP400NL-214ENST00000641289 2402 ntBASIC20.7■□□□□ 0.91
ZCCHC3Q9NUD5 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZCCHC3Q9NUD5 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
ZCCHC3Q9NUD5 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZCCHC3Q9NUD5 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZCCHC3Q9NUD5 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZCCHC3Q9NUD5 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZCCHC3Q9NUD5 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
ZCCHC3Q9NUD5 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
ZCCHC3Q9NUD5 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZCCHC3Q9NUD5 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.7■□□□□ 0.9
ZCCHC3Q9NUD5 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZCCHC3Q9NUD5 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.7■□□□□ 0.9
ZCCHC3Q9NUD5 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms