Protein–RNA interactions for Protein: Q9HCN4

GPN1, GPN-loop GTPase 1, humanhuman

Predicted RBP Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1Q9HCN4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
GPN1Q9HCN4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
GPN1Q9HCN4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.77■□□□□ 0.6
GPN1Q9HCN4 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
GPN1Q9HCN4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
GPN1Q9HCN4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GPN1Q9HCN4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
GPN1Q9HCN4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
GPN1Q9HCN4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GPN1Q9HCN4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GPN1Q9HCN4 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
GPN1Q9HCN4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GPN1Q9HCN4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GPN1Q9HCN4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
GPN1Q9HCN4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GPN1Q9HCN4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.77■□□□□ 0.6
GPN1Q9HCN4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GPN1Q9HCN4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
GPN1Q9HCN4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
GPN1Q9HCN4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
GPN1Q9HCN4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
GPN1Q9HCN4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPN1Q9HCN4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPN1Q9HCN4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPN1Q9HCN4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPN1Q9HCN4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPN1Q9HCN4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPN1Q9HCN4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPN1Q9HCN4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPN1Q9HCN4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
GPN1Q9HCN4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPN1Q9HCN4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GPN1Q9HCN4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GPN1Q9HCN4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPN1Q9HCN4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
GPN1Q9HCN4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
GPN1Q9HCN4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GPN1Q9HCN4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GPN1Q9HCN4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
GPN1Q9HCN4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.75■□□□□ 0.59
GPN1Q9HCN4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GPN1Q9HCN4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GPN1Q9HCN4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GPN1Q9HCN4 AC079630.1-202ENST00000618127 1840 ntBASIC18.75■□□□□ 0.59
GPN1Q9HCN4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GPN1Q9HCN4 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GPN1Q9HCN4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GPN1Q9HCN4 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
GPN1Q9HCN4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.75■□□□□ 0.59
GPN1Q9HCN4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
GPN1Q9HCN4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
GPN1Q9HCN4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GPN1Q9HCN4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GPN1Q9HCN4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GPN1Q9HCN4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GPN1Q9HCN4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GPN1Q9HCN4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.74■□□□□ 0.59
GPN1Q9HCN4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
GPN1Q9HCN4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.74■□□□□ 0.59
GPN1Q9HCN4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
GPN1Q9HCN4 FAM99A-202ENST00000538190 1989 ntBASIC18.74■□□□□ 0.59
GPN1Q9HCN4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GPN1Q9HCN4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
GPN1Q9HCN4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GPN1Q9HCN4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.74■□□□□ 0.59
GPN1Q9HCN4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC18.74■□□□□ 0.59
GPN1Q9HCN4 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
GPN1Q9HCN4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.74■□□□□ 0.59
GPN1Q9HCN4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GPN1Q9HCN4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GPN1Q9HCN4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.74■□□□□ 0.59
GPN1Q9HCN4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GPN1Q9HCN4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GPN1Q9HCN4 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.74■□□□□ 0.59
GPN1Q9HCN4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
GPN1Q9HCN4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
GPN1Q9HCN4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GPN1Q9HCN4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GPN1Q9HCN4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GPN1Q9HCN4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GPN1Q9HCN4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
GPN1Q9HCN4 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GPN1Q9HCN4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GPN1Q9HCN4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GPN1Q9HCN4 AC080038.3-201ENST00000623346 1952 ntBASIC18.73■□□□□ 0.59
GPN1Q9HCN4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GPN1Q9HCN4 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GPN1Q9HCN4 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
GPN1Q9HCN4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
GPN1Q9HCN4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GPN1Q9HCN4 AC025884.2-201ENST00000553429 711 ntBASIC18.72■□□□□ 0.59
GPN1Q9HCN4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
GPN1Q9HCN4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GPN1Q9HCN4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GPN1Q9HCN4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GPN1Q9HCN4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GPN1Q9HCN4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
GPN1Q9HCN4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GPN1Q9HCN4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
GPN1Q9HCN4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms