Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
CHD8Q9HCK8 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CHD8Q9HCK8 AL022069.1-201ENST00000568025 1636 ntBASIC21.03■□□□□ 0.96
CHD8Q9HCK8 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHD8Q9HCK8 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHD8Q9HCK8 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHD8Q9HCK8 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CHD8Q9HCK8 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.02■□□□□ 0.96
CHD8Q9HCK8 RARRES2P4-201ENST00000514074 484 ntBASIC21.02■□□□□ 0.96
CHD8Q9HCK8 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHD8Q9HCK8 AC141586.4-201ENST00000624558 1573 ntBASIC21.02■□□□□ 0.96
CHD8Q9HCK8 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.02■□□□□ 0.96
CHD8Q9HCK8 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CHD8Q9HCK8 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHD8Q9HCK8 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CHD8Q9HCK8 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.02■□□□□ 0.96
CHD8Q9HCK8 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.02■□□□□ 0.96
CHD8Q9HCK8 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.02■□□□□ 0.96
CHD8Q9HCK8 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CHD8Q9HCK8 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.01■□□□□ 0.95
CHD8Q9HCK8 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHD8Q9HCK8 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.01■□□□□ 0.95
CHD8Q9HCK8 AL445228.2-201ENST00000605589 952 ntBASIC21.01■□□□□ 0.95
CHD8Q9HCK8 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHD8Q9HCK8 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHD8Q9HCK8 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CHD8Q9HCK8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.01■□□□□ 0.95
CHD8Q9HCK8 AC105036.2-201ENST00000569468 176 ntBASIC21.01■□□□□ 0.95
CHD8Q9HCK8 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHD8Q9HCK8 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHD8Q9HCK8 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21■□□□□ 0.95
CHD8Q9HCK8 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21■□□□□ 0.95
CHD8Q9HCK8 OR2I1P-207ENST00000453522 948 ntBASIC21■□□□□ 0.95
CHD8Q9HCK8 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CHD8Q9HCK8 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
CHD8Q9HCK8 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21■□□□□ 0.95
CHD8Q9HCK8 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHD8Q9HCK8 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21■□□□□ 0.95
CHD8Q9HCK8 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CHD8Q9HCK8 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHD8Q9HCK8 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHD8Q9HCK8 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHD8Q9HCK8 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21■□□□□ 0.95
CHD8Q9HCK8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHD8Q9HCK8 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHD8Q9HCK8 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.99■□□□□ 0.95
CHD8Q9HCK8 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHD8Q9HCK8 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.99■□□□□ 0.95
CHD8Q9HCK8 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CHD8Q9HCK8 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CHD8Q9HCK8 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.99■□□□□ 0.95
CHD8Q9HCK8 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.99■□□□□ 0.95
CHD8Q9HCK8 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.99■□□□□ 0.95
CHD8Q9HCK8 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.99■□□□□ 0.95
CHD8Q9HCK8 MIR4758-201ENST00000577688 71 ntBASIC20.99■□□□□ 0.95
CHD8Q9HCK8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.99■□□□□ 0.95
CHD8Q9HCK8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHD8Q9HCK8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.99■□□□□ 0.95
CHD8Q9HCK8 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHD8Q9HCK8 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.98■□□□□ 0.95
CHD8Q9HCK8 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHD8Q9HCK8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.98■□□□□ 0.95
CHD8Q9HCK8 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHD8Q9HCK8 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CHD8Q9HCK8 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.98■□□□□ 0.95
CHD8Q9HCK8 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHD8Q9HCK8 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CHD8Q9HCK8 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHD8Q9HCK8 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHD8Q9HCK8 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.98■□□□□ 0.95
CHD8Q9HCK8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.98■□□□□ 0.95
CHD8Q9HCK8 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHD8Q9HCK8 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.98■□□□□ 0.95
CHD8Q9HCK8 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
CHD8Q9HCK8 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.97■□□□□ 0.95
CHD8Q9HCK8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.97■□□□□ 0.95
CHD8Q9HCK8 LINC01023-201ENST00000606054 436 ntBASIC20.97■□□□□ 0.95
CHD8Q9HCK8 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CHD8Q9HCK8 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CHD8Q9HCK8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD8Q9HCK8 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CHD8Q9HCK8 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CHD8Q9HCK8 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.97■□□□□ 0.95
CHD8Q9HCK8 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD8Q9HCK8 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.96■□□□□ 0.95
CHD8Q9HCK8 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.96■□□□□ 0.95
CHD8Q9HCK8 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.96■□□□□ 0.95
CHD8Q9HCK8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHD8Q9HCK8 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHD8Q9HCK8 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHD8Q9HCK8 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.96■□□□□ 0.95
CHD8Q9HCK8 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CHD8Q9HCK8 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
CHD8Q9HCK8 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.96■□□□□ 0.95
CHD8Q9HCK8 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHD8Q9HCK8 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CHD8Q9HCK8 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.95
CHD8Q9HCK8 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.95
CHD8Q9HCK8 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHD8Q9HCK8 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms