Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCNX3Q9H6A9 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCNX3Q9H6A9 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.16■□□□□ 0.82
PCNX3Q9H6A9 AC068473.5-201ENST00000616428 2072 ntBASIC20.16■□□□□ 0.82
PCNX3Q9H6A9 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.16■□□□□ 0.82
PCNX3Q9H6A9 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCNX3Q9H6A9 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.15■□□□□ 0.82
PCNX3Q9H6A9 AL499627.2-201ENST00000606283 725 ntBASIC20.15■□□□□ 0.82
PCNX3Q9H6A9 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.15■□□□□ 0.82
PCNX3Q9H6A9 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
PCNX3Q9H6A9 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCNX3Q9H6A9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.15■□□□□ 0.82
PCNX3Q9H6A9 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.15■□□□□ 0.82
PCNX3Q9H6A9 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.15■□□□□ 0.82
PCNX3Q9H6A9 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCNX3Q9H6A9 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCNX3Q9H6A9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.15■□□□□ 0.82
PCNX3Q9H6A9 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCNX3Q9H6A9 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCNX3Q9H6A9 AC133637.1-201ENST00000624115 1537 ntBASIC20.15■□□□□ 0.82
PCNX3Q9H6A9 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.15■□□□□ 0.82
PCNX3Q9H6A9 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PCNX3Q9H6A9 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
PCNX3Q9H6A9 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.14■□□□□ 0.82
PCNX3Q9H6A9 MIR638-201ENST00000385237 100 ntBASIC20.14■□□□□ 0.81
PCNX3Q9H6A9 MIR3181-201ENST00000578512 73 ntBASIC20.14■□□□□ 0.81
PCNX3Q9H6A9 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCNX3Q9H6A9 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
PCNX3Q9H6A9 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCNX3Q9H6A9 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCNX3Q9H6A9 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCNX3Q9H6A9 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCNX3Q9H6A9 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
PCNX3Q9H6A9 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCNX3Q9H6A9 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.14■□□□□ 0.81
PCNX3Q9H6A9 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.14■□□□□ 0.81
PCNX3Q9H6A9 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.14■□□□□ 0.81
PCNX3Q9H6A9 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCNX3Q9H6A9 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCNX3Q9H6A9 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.13■□□□□ 0.81
PCNX3Q9H6A9 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCNX3Q9H6A9 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCNX3Q9H6A9 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCNX3Q9H6A9 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PCNX3Q9H6A9 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCNX3Q9H6A9 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.13■□□□□ 0.81
PCNX3Q9H6A9 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.13■□□□□ 0.81
PCNX3Q9H6A9 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.13■□□□□ 0.81
PCNX3Q9H6A9 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.13■□□□□ 0.81
PCNX3Q9H6A9 AC009086.3-201ENST00000623486 1008 ntBASIC20.13■□□□□ 0.81
PCNX3Q9H6A9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCNX3Q9H6A9 AC135279.3-201ENST00000610945 1311 ntBASIC20.13■□□□□ 0.81
PCNX3Q9H6A9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.13■□□□□ 0.81
PCNX3Q9H6A9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
PCNX3Q9H6A9 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCNX3Q9H6A9 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCNX3Q9H6A9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.12■□□□□ 0.81
PCNX3Q9H6A9 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCNX3Q9H6A9 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCNX3Q9H6A9 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.12■□□□□ 0.81
PCNX3Q9H6A9 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.12■□□□□ 0.81
PCNX3Q9H6A9 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCNX3Q9H6A9 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PCNX3Q9H6A9 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCNX3Q9H6A9 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCNX3Q9H6A9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCNX3Q9H6A9 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.12■□□□□ 0.81
PCNX3Q9H6A9 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCNX3Q9H6A9 SRD5A1P1-201ENST00000442297 786 ntBASIC20.12■□□□□ 0.81
PCNX3Q9H6A9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.12■□□□□ 0.81
PCNX3Q9H6A9 pRNA.6-201ENST00000610482 90 ntBASIC20.12■□□□□ 0.81
PCNX3Q9H6A9 pRNA.5-201ENST00000612139 90 ntBASIC20.12■□□□□ 0.81
PCNX3Q9H6A9 pRNA.11-201ENST00000618423 90 ntBASIC20.12■□□□□ 0.81
PCNX3Q9H6A9 pRNA.13-201ENST00000619112 90 ntBASIC20.12■□□□□ 0.81
PCNX3Q9H6A9 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCNX3Q9H6A9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCNX3Q9H6A9 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCNX3Q9H6A9 LINC01960-201ENST00000563759 1884 ntBASIC20.11■□□□□ 0.81
PCNX3Q9H6A9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCNX3Q9H6A9 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.11■□□□□ 0.81
PCNX3Q9H6A9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.11■□□□□ 0.81
PCNX3Q9H6A9 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCNX3Q9H6A9 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PCNX3Q9H6A9 PBX2P1-201ENST00000493219 1291 ntBASIC20.11■□□□□ 0.81
PCNX3Q9H6A9 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCNX3Q9H6A9 AL138724.1-201ENST00000606771 1088 ntBASIC20.11■□□□□ 0.81
PCNX3Q9H6A9 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCNX3Q9H6A9 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCNX3Q9H6A9 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCNX3Q9H6A9 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCNX3Q9H6A9 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCNX3Q9H6A9 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.11■□□□□ 0.81
PCNX3Q9H6A9 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.11■□□□□ 0.81
PCNX3Q9H6A9 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.81
PCNX3Q9H6A9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCNX3Q9H6A9 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCNX3Q9H6A9 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCNX3Q9H6A9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
PCNX3Q9H6A9 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCNX3Q9H6A9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 147.7 ms