Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NELFAQ9H3P2 FP325331.1-202ENST00000623531 1380 ntBASIC19.68■□□□□ 0.74
NELFAQ9H3P2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NELFAQ9H3P2 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NELFAQ9H3P2 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NELFAQ9H3P2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NELFAQ9H3P2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
NELFAQ9H3P2 SRD5A1P1-201ENST00000442297 786 ntBASIC19.67■□□□□ 0.74
NELFAQ9H3P2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.67■□□□□ 0.74
NELFAQ9H3P2 LINC01529-204ENST00000636474 1715 ntBASIC19.67■□□□□ 0.74
NELFAQ9H3P2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.67■□□□□ 0.74
NELFAQ9H3P2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NELFAQ9H3P2 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.67■□□□□ 0.74
NELFAQ9H3P2 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NELFAQ9H3P2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
NELFAQ9H3P2 AC133561.1-201ENST00000568600 2415 ntBASIC19.66■□□□□ 0.74
NELFAQ9H3P2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NELFAQ9H3P2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.66■□□□□ 0.74
NELFAQ9H3P2 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NELFAQ9H3P2 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NELFAQ9H3P2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.66■□□□□ 0.74
NELFAQ9H3P2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
NELFAQ9H3P2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NELFAQ9H3P2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.66■□□□□ 0.74
NELFAQ9H3P2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NELFAQ9H3P2 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NELFAQ9H3P2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.66■□□□□ 0.74
NELFAQ9H3P2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
NELFAQ9H3P2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NELFAQ9H3P2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NELFAQ9H3P2 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
NELFAQ9H3P2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
NELFAQ9H3P2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.65■□□□□ 0.74
NELFAQ9H3P2 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NELFAQ9H3P2 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.65■□□□□ 0.74
NELFAQ9H3P2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NELFAQ9H3P2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.65■□□□□ 0.74
NELFAQ9H3P2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NELFAQ9H3P2 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
NELFAQ9H3P2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.65■□□□□ 0.74
NELFAQ9H3P2 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NELFAQ9H3P2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NELFAQ9H3P2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NELFAQ9H3P2 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NELFAQ9H3P2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NELFAQ9H3P2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NELFAQ9H3P2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.64■□□□□ 0.73
NELFAQ9H3P2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NELFAQ9H3P2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NELFAQ9H3P2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.64■□□□□ 0.73
NELFAQ9H3P2 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NELFAQ9H3P2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.64■□□□□ 0.73
NELFAQ9H3P2 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NELFAQ9H3P2 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
NELFAQ9H3P2 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NELFAQ9H3P2 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
NELFAQ9H3P2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NELFAQ9H3P2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NELFAQ9H3P2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NELFAQ9H3P2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NELFAQ9H3P2 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.63■□□□□ 0.73
NELFAQ9H3P2 AC099791.2-201ENST00000605725 427 ntBASIC19.63■□□□□ 0.73
NELFAQ9H3P2 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.63■□□□□ 0.73
NELFAQ9H3P2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
NELFAQ9H3P2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NELFAQ9H3P2 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NELFAQ9H3P2 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NELFAQ9H3P2 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
NELFAQ9H3P2 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
NELFAQ9H3P2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.62■□□□□ 0.73
NELFAQ9H3P2 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
NELFAQ9H3P2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
NELFAQ9H3P2 AC006455.2-201ENST00000429931 906 ntBASIC19.62■□□□□ 0.73
NELFAQ9H3P2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.62■□□□□ 0.73
NELFAQ9H3P2 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
NELFAQ9H3P2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NELFAQ9H3P2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NELFAQ9H3P2 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NELFAQ9H3P2 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
NELFAQ9H3P2 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.61■□□□□ 0.73
NELFAQ9H3P2 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NELFAQ9H3P2 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NELFAQ9H3P2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
NELFAQ9H3P2 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.61■□□□□ 0.73
NELFAQ9H3P2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
NELFAQ9H3P2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.61■□□□□ 0.73
NELFAQ9H3P2 DUX4L4-201ENST00000566884 1269 ntBASIC19.61■□□□□ 0.73
NELFAQ9H3P2 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NELFAQ9H3P2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.61■□□□□ 0.73
NELFAQ9H3P2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
NELFAQ9H3P2 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
NELFAQ9H3P2 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
NELFAQ9H3P2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NELFAQ9H3P2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NELFAQ9H3P2 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NELFAQ9H3P2 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
NELFAQ9H3P2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NELFAQ9H3P2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.6■□□□□ 0.73
NELFAQ9H3P2 AC241377.3-202ENST00000626088 1088 ntBASIC19.6■□□□□ 0.73
NELFAQ9H3P2 AC241585.3-202ENST00000628937 1088 ntBASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms