Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBQLN3Q9H347 AC106739.1-201ENST00000617035 715 ntBASIC20.48■□□□□ 0.87
UBQLN3Q9H347 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.48■□□□□ 0.87
UBQLN3Q9H347 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.48■□□□□ 0.87
UBQLN3Q9H347 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBQLN3Q9H347 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBQLN3Q9H347 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.48■□□□□ 0.87
UBQLN3Q9H347 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
UBQLN3Q9H347 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBQLN3Q9H347 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBQLN3Q9H347 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.47■□□□□ 0.87
UBQLN3Q9H347 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UBQLN3Q9H347 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBQLN3Q9H347 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBQLN3Q9H347 AC099791.2-201ENST00000605725 427 ntBASIC20.47■□□□□ 0.87
UBQLN3Q9H347 AC241377.3-202ENST00000626088 1088 ntBASIC20.47■□□□□ 0.87
UBQLN3Q9H347 AC241585.3-202ENST00000628937 1088 ntBASIC20.47■□□□□ 0.87
UBQLN3Q9H347 AC245100.8-202ENST00000629247 1058 ntBASIC20.47■□□□□ 0.87
UBQLN3Q9H347 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBQLN3Q9H347 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
UBQLN3Q9H347 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
UBQLN3Q9H347 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
UBQLN3Q9H347 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBQLN3Q9H347 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBQLN3Q9H347 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBQLN3Q9H347 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.46■□□□□ 0.87
UBQLN3Q9H347 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBQLN3Q9H347 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBQLN3Q9H347 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBQLN3Q9H347 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBQLN3Q9H347 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.46■□□□□ 0.87
UBQLN3Q9H347 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBQLN3Q9H347 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.46■□□□□ 0.87
UBQLN3Q9H347 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.46■□□□□ 0.87
UBQLN3Q9H347 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBQLN3Q9H347 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBQLN3Q9H347 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBQLN3Q9H347 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.46■□□□□ 0.87
UBQLN3Q9H347 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBQLN3Q9H347 AC019069.1-201ENST00000610008 1333 ntBASIC20.46■□□□□ 0.87
UBQLN3Q9H347 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBQLN3Q9H347 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBQLN3Q9H347 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBQLN3Q9H347 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
UBQLN3Q9H347 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBQLN3Q9H347 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBQLN3Q9H347 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBQLN3Q9H347 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBQLN3Q9H347 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBQLN3Q9H347 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
UBQLN3Q9H347 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.45■□□□□ 0.86
UBQLN3Q9H347 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBQLN3Q9H347 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
UBQLN3Q9H347 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
UBQLN3Q9H347 AL136162.1-201ENST00000607711 1078 ntBASIC20.45■□□□□ 0.86
UBQLN3Q9H347 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBQLN3Q9H347 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
UBQLN3Q9H347 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
UBQLN3Q9H347 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBQLN3Q9H347 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBQLN3Q9H347 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBQLN3Q9H347 SYT6-210ENST00000641643 1587 ntBASIC20.44■□□□□ 0.86
UBQLN3Q9H347 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
UBQLN3Q9H347 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.44■□□□□ 0.86
UBQLN3Q9H347 PBX2P1-201ENST00000493219 1291 ntBASIC20.44■□□□□ 0.86
UBQLN3Q9H347 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.44■□□□□ 0.86
UBQLN3Q9H347 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
UBQLN3Q9H347 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.44■□□□□ 0.86
UBQLN3Q9H347 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBQLN3Q9H347 AC135279.3-201ENST00000610945 1311 ntBASIC20.44■□□□□ 0.86
UBQLN3Q9H347 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBQLN3Q9H347 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBQLN3Q9H347 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBQLN3Q9H347 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBQLN3Q9H347 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
UBQLN3Q9H347 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.43■□□□□ 0.86
UBQLN3Q9H347 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBQLN3Q9H347 AC024257.2-201ENST00000549699 147 ntBASIC20.43■□□□□ 0.86
UBQLN3Q9H347 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.43■□□□□ 0.86
UBQLN3Q9H347 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UBQLN3Q9H347 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.43■□□□□ 0.86
UBQLN3Q9H347 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBQLN3Q9H347 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBQLN3Q9H347 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBQLN3Q9H347 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
UBQLN3Q9H347 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
UBQLN3Q9H347 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBQLN3Q9H347 EP400NL-214ENST00000641289 2402 ntBASIC20.42■□□□□ 0.86
UBQLN3Q9H347 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBQLN3Q9H347 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBQLN3Q9H347 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
UBQLN3Q9H347 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBQLN3Q9H347 SERBP1P1-201ENST00000396021 1160 ntBASIC20.42■□□□□ 0.86
UBQLN3Q9H347 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBQLN3Q9H347 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.42■□□□□ 0.86
UBQLN3Q9H347 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.42■□□□□ 0.86
UBQLN3Q9H347 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
UBQLN3Q9H347 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBQLN3Q9H347 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBQLN3Q9H347 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms