Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SPTBN4Q9H254 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SPTBN4Q9H254 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.59■■□□□ 1.05
SPTBN4Q9H254 MIR4497-201ENST00000583208 89 ntBASIC21.59■■□□□ 1.05
SPTBN4Q9H254 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.59■■□□□ 1.05
SPTBN4Q9H254 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
SPTBN4Q9H254 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.58■■□□□ 1.05
SPTBN4Q9H254 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.58■■□□□ 1.04
SPTBN4Q9H254 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.58■■□□□ 1.04
SPTBN4Q9H254 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.58■■□□□ 1.04
SPTBN4Q9H254 AP004609.3-201ENST00000610705 1884 ntBASIC21.58■■□□□ 1.04
SPTBN4Q9H254 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.57■■□□□ 1.04
SPTBN4Q9H254 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.57■■□□□ 1.04
SPTBN4Q9H254 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SPTBN4Q9H254 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.57■■□□□ 1.04
SPTBN4Q9H254 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.57■■□□□ 1.04
SPTBN4Q9H254 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.57■■□□□ 1.04
SPTBN4Q9H254 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.57■■□□□ 1.04
SPTBN4Q9H254 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.57■■□□□ 1.04
SPTBN4Q9H254 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.57■■□□□ 1.04
SPTBN4Q9H254 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SPTBN4Q9H254 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
SPTBN4Q9H254 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.56■■□□□ 1.04
SPTBN4Q9H254 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.56■■□□□ 1.04
SPTBN4Q9H254 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SPTBN4Q9H254 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SPTBN4Q9H254 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.56■■□□□ 1.04
SPTBN4Q9H254 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SPTBN4Q9H254 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
SPTBN4Q9H254 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SPTBN4Q9H254 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.56■■□□□ 1.04
SPTBN4Q9H254 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
SPTBN4Q9H254 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.56■■□□□ 1.04
SPTBN4Q9H254 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.56■■□□□ 1.04
SPTBN4Q9H254 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.55■■□□□ 1.04
SPTBN4Q9H254 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.55■■□□□ 1.04
SPTBN4Q9H254 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.55■■□□□ 1.04
SPTBN4Q9H254 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.55■■□□□ 1.04
SPTBN4Q9H254 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.55■■□□□ 1.04
SPTBN4Q9H254 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.55■■□□□ 1.04
SPTBN4Q9H254 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
SPTBN4Q9H254 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPTBN4Q9H254 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPTBN4Q9H254 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPTBN4Q9H254 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.55■■□□□ 1.04
SPTBN4Q9H254 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPTBN4Q9H254 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SPTBN4Q9H254 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPTBN4Q9H254 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SPTBN4Q9H254 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.54■■□□□ 1.04
SPTBN4Q9H254 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SPTBN4Q9H254 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SPTBN4Q9H254 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.54■■□□□ 1.04
SPTBN4Q9H254 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
SPTBN4Q9H254 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.54■■□□□ 1.04
SPTBN4Q9H254 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.54■■□□□ 1.04
SPTBN4Q9H254 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SPTBN4Q9H254 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
SPTBN4Q9H254 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.54■■□□□ 1.04
SPTBN4Q9H254 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.53■■□□□ 1.04
SPTBN4Q9H254 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SPTBN4Q9H254 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SPTBN4Q9H254 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SPTBN4Q9H254 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
SPTBN4Q9H254 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SPTBN4Q9H254 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SPTBN4Q9H254 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SPTBN4Q9H254 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SPTBN4Q9H254 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.52■■□□□ 1.04
SPTBN4Q9H254 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.52■■□□□ 1.04
SPTBN4Q9H254 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.52■■□□□ 1.04
SPTBN4Q9H254 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SPTBN4Q9H254 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SPTBN4Q9H254 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SPTBN4Q9H254 AC141586.4-201ENST00000624558 1573 ntBASIC21.52■■□□□ 1.04
SPTBN4Q9H254 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.52■■□□□ 1.04
SPTBN4Q9H254 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SPTBN4Q9H254 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
SPTBN4Q9H254 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SPTBN4Q9H254 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.51■■□□□ 1.03
SPTBN4Q9H254 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.51■■□□□ 1.03
SPTBN4Q9H254 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SPTBN4Q9H254 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SPTBN4Q9H254 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
SPTBN4Q9H254 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SPTBN4Q9H254 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SPTBN4Q9H254 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SPTBN4Q9H254 OR2I1P-207ENST00000453522 948 ntBASIC21.5■■□□□ 1.03
SPTBN4Q9H254 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.5■■□□□ 1.03
SPTBN4Q9H254 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SPTBN4Q9H254 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SPTBN4Q9H254 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
SPTBN4Q9H254 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SPTBN4Q9H254 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.5■■□□□ 1.03
SPTBN4Q9H254 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SPTBN4Q9H254 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SPTBN4Q9H254 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SPTBN4Q9H254 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.49■■□□□ 1.03
SPTBN4Q9H254 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.49■■□□□ 1.03
SPTBN4Q9H254 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms