Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
CDH23Q9H251 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDH23Q9H251 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDH23Q9H251 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.88■■□□□ 1.41
CDH23Q9H251 KRT18P11-201ENST00000435214 1283 ntBASIC23.87■■□□□ 1.41
CDH23Q9H251 TSPY6P-201ENST00000448518 926 ntBASIC23.87■■□□□ 1.41
CDH23Q9H251 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
CDH23Q9H251 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CDH23Q9H251 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
CDH23Q9H251 AC010525.1-201ENST00000585559 441 ntBASIC23.87■■□□□ 1.41
CDH23Q9H251 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CDH23Q9H251 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDH23Q9H251 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.86■■□□□ 1.41
CDH23Q9H251 OR2I1P-207ENST00000453522 948 ntBASIC23.86■■□□□ 1.41
CDH23Q9H251 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDH23Q9H251 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC23.86■■□□□ 1.41
CDH23Q9H251 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.86■■□□□ 1.41
CDH23Q9H251 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDH23Q9H251 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CDH23Q9H251 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDH23Q9H251 AC105233.4-201ENST00000642045 216 ntBASIC23.85■■□□□ 1.41
CDH23Q9H251 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.85■■□□□ 1.41
CDH23Q9H251 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDH23Q9H251 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDH23Q9H251 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDH23Q9H251 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
CDH23Q9H251 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CDH23Q9H251 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDH23Q9H251 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC23.85■■□□□ 1.41
CDH23Q9H251 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CDH23Q9H251 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC23.85■■□□□ 1.41
CDH23Q9H251 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.85■■□□□ 1.41
CDH23Q9H251 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDH23Q9H251 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDH23Q9H251 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDH23Q9H251 AC083906.2-201ENST00000511578 360 ntBASIC23.84■■□□□ 1.41
CDH23Q9H251 CBFB-203ENST00000561924 584 ntTSL 5 BASIC23.84■■□□□ 1.41
CDH23Q9H251 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CDH23Q9H251 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDH23Q9H251 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC23.84■■□□□ 1.41
CDH23Q9H251 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CDH23Q9H251 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDH23Q9H251 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CDH23Q9H251 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDH23Q9H251 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
CDH23Q9H251 POU5F1P3-201ENST00000428824 1078 ntBASIC23.83■■□□□ 1.4
CDH23Q9H251 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
CDH23Q9H251 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDH23Q9H251 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDH23Q9H251 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.82■■□□□ 1.4
CDH23Q9H251 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CDH23Q9H251 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
CDH23Q9H251 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CDH23Q9H251 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.82■■□□□ 1.4
CDH23Q9H251 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CDH23Q9H251 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDH23Q9H251 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CDH23Q9H251 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23.81■■□□□ 1.4
CDH23Q9H251 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.81■■□□□ 1.4
CDH23Q9H251 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.81■■□□□ 1.4
CDH23Q9H251 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CDH23Q9H251 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDH23Q9H251 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CDH23Q9H251 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CDH23Q9H251 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDH23Q9H251 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
CDH23Q9H251 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CDH23Q9H251 DUX4L4-201ENST00000566884 1269 ntBASIC23.8■■□□□ 1.4
CDH23Q9H251 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC23.8■■□□□ 1.4
CDH23Q9H251 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CDH23Q9H251 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDH23Q9H251 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CDH23Q9H251 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CDH23Q9H251 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.79■■□□□ 1.4
CDH23Q9H251 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CDH23Q9H251 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDH23Q9H251 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CDH23Q9H251 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDH23Q9H251 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.79■■□□□ 1.4
CDH23Q9H251 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
CDH23Q9H251 FAM201B-201ENST00000458407 597 ntBASIC23.78■■□□□ 1.4
CDH23Q9H251 CASP6-205ENST00000505486 538 ntTSL 4 BASIC23.78■■□□□ 1.4
CDH23Q9H251 RGMA-211ENST00000557420 989 ntTSL 3 BASIC23.78■■□□□ 1.4
CDH23Q9H251 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDH23Q9H251 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDH23Q9H251 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.78■■□□□ 1.4
CDH23Q9H251 BX005040.4-201ENST00000637145 1518 ntBASIC23.78■■□□□ 1.4
CDH23Q9H251 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDH23Q9H251 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.78■■□□□ 1.4
CDH23Q9H251 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.78■■□□□ 1.4
CDH23Q9H251 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDH23Q9H251 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
CDH23Q9H251 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CDH23Q9H251 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CDH23Q9H251 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CDH23Q9H251 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDH23Q9H251 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
CDH23Q9H251 AC092803.2-201ENST00000564287 1899 ntBASIC23.77■■□□□ 1.4
CDH23Q9H251 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.77■■□□□ 1.4
CDH23Q9H251 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms