Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
NUCKS1Q9H1E3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.99■■□□□ 1.43
NUCKS1Q9H1E3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
NUCKS1Q9H1E3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
NUCKS1Q9H1E3 CLDN5-201ENST00000403084 2357 ntBASIC23.98■■□□□ 1.43
NUCKS1Q9H1E3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.98■■□□□ 1.43
NUCKS1Q9H1E3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
NUCKS1Q9H1E3 AC005703.6-201ENST00000623265 1329 ntBASIC23.98■■□□□ 1.43
NUCKS1Q9H1E3 FP325331.1-202ENST00000623531 1380 ntBASIC23.98■■□□□ 1.43
NUCKS1Q9H1E3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
NUCKS1Q9H1E3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
NUCKS1Q9H1E3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
NUCKS1Q9H1E3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
NUCKS1Q9H1E3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
NUCKS1Q9H1E3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
NUCKS1Q9H1E3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
NUCKS1Q9H1E3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
NUCKS1Q9H1E3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
NUCKS1Q9H1E3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.97■■□□□ 1.43
NUCKS1Q9H1E3 AL356441.2-201ENST00000443009 864 ntBASIC23.97■■□□□ 1.43
NUCKS1Q9H1E3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
NUCKS1Q9H1E3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.97■■□□□ 1.43
NUCKS1Q9H1E3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
NUCKS1Q9H1E3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
NUCKS1Q9H1E3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
NUCKS1Q9H1E3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NUCKS1Q9H1E3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
NUCKS1Q9H1E3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NUCKS1Q9H1E3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.96■■□□□ 1.43
NUCKS1Q9H1E3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.96■■□□□ 1.43
NUCKS1Q9H1E3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
NUCKS1Q9H1E3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.96■■□□□ 1.43
NUCKS1Q9H1E3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NUCKS1Q9H1E3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
NUCKS1Q9H1E3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
NUCKS1Q9H1E3 LINC01529-204ENST00000636474 1715 ntBASIC23.96■■□□□ 1.43
NUCKS1Q9H1E3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.95■■□□□ 1.43
NUCKS1Q9H1E3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
NUCKS1Q9H1E3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.95■■□□□ 1.42
NUCKS1Q9H1E3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.95■■□□□ 1.42
NUCKS1Q9H1E3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
NUCKS1Q9H1E3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
NUCKS1Q9H1E3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
NUCKS1Q9H1E3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.94■■□□□ 1.42
NUCKS1Q9H1E3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.94■■□□□ 1.42
NUCKS1Q9H1E3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NUCKS1Q9H1E3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
NUCKS1Q9H1E3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.94■■□□□ 1.42
NUCKS1Q9H1E3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.94■■□□□ 1.42
NUCKS1Q9H1E3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
NUCKS1Q9H1E3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
NUCKS1Q9H1E3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
NUCKS1Q9H1E3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NUCKS1Q9H1E3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.94■■□□□ 1.42
NUCKS1Q9H1E3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.94■■□□□ 1.42
NUCKS1Q9H1E3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.93■■□□□ 1.42
NUCKS1Q9H1E3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NUCKS1Q9H1E3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NUCKS1Q9H1E3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.93■■□□□ 1.42
NUCKS1Q9H1E3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NUCKS1Q9H1E3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
NUCKS1Q9H1E3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.93■■□□□ 1.42
NUCKS1Q9H1E3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.93■■□□□ 1.42
NUCKS1Q9H1E3 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.93■■□□□ 1.42
NUCKS1Q9H1E3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.93■■□□□ 1.42
NUCKS1Q9H1E3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
NUCKS1Q9H1E3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NUCKS1Q9H1E3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
NUCKS1Q9H1E3 AC092053.2-201ENST00000640557 1818 ntBASIC23.92■■□□□ 1.42
NUCKS1Q9H1E3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
NUCKS1Q9H1E3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.92■■□□□ 1.42
NUCKS1Q9H1E3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.92■■□□□ 1.42
NUCKS1Q9H1E3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
NUCKS1Q9H1E3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NUCKS1Q9H1E3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.92■■□□□ 1.42
NUCKS1Q9H1E3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.92■■□□□ 1.42
NUCKS1Q9H1E3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
NUCKS1Q9H1E3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NUCKS1Q9H1E3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
NUCKS1Q9H1E3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NUCKS1Q9H1E3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.91■■□□□ 1.42
NUCKS1Q9H1E3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NUCKS1Q9H1E3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NUCKS1Q9H1E3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
NUCKS1Q9H1E3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.91■■□□□ 1.42
NUCKS1Q9H1E3 AC139530.1-201ENST00000575312 1977 ntBASIC23.91■■□□□ 1.42
NUCKS1Q9H1E3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NUCKS1Q9H1E3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NUCKS1Q9H1E3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC23.91■■□□□ 1.42
NUCKS1Q9H1E3 KRT16P3-201ENST00000439127 1283 ntBASIC23.91■■□□□ 1.42
NUCKS1Q9H1E3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.91■■□□□ 1.42
NUCKS1Q9H1E3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.91■■□□□ 1.42
NUCKS1Q9H1E3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
NUCKS1Q9H1E3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
NUCKS1Q9H1E3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NUCKS1Q9H1E3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
NUCKS1Q9H1E3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NUCKS1Q9H1E3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NUCKS1Q9H1E3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
NUCKS1Q9H1E3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms