Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CYSTM1Q9H1C7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC13.05□□□□□ -0.32
CYSTM1Q9H1C7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CYSTM1Q9H1C7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC13.05□□□□□ -0.32
CYSTM1Q9H1C7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CYSTM1Q9H1C7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CYSTM1Q9H1C7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC13.04□□□□□ -0.32
CYSTM1Q9H1C7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CYSTM1Q9H1C7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
CYSTM1Q9H1C7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CYSTM1Q9H1C7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CYSTM1Q9H1C7 MVK-208ENST00000539696 608 ntTSL 5 BASIC13.04□□□□□ -0.32
CYSTM1Q9H1C7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC13.04□□□□□ -0.32
CYSTM1Q9H1C7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CYSTM1Q9H1C7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CYSTM1Q9H1C7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CYSTM1Q9H1C7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CYSTM1Q9H1C7 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CYSTM1Q9H1C7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC13.04□□□□□ -0.32
CYSTM1Q9H1C7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC13.04□□□□□ -0.32
CYSTM1Q9H1C7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CYSTM1Q9H1C7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CYSTM1Q9H1C7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CYSTM1Q9H1C7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CYSTM1Q9H1C7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC13.04□□□□□ -0.32
CYSTM1Q9H1C7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CYSTM1Q9H1C7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CYSTM1Q9H1C7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CYSTM1Q9H1C7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CYSTM1Q9H1C7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CYSTM1Q9H1C7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC13.03□□□□□ -0.32
CYSTM1Q9H1C7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CYSTM1Q9H1C7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC13.03□□□□□ -0.32
CYSTM1Q9H1C7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC13.03□□□□□ -0.32
CYSTM1Q9H1C7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CYSTM1Q9H1C7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CYSTM1Q9H1C7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CYSTM1Q9H1C7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CYSTM1Q9H1C7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CYSTM1Q9H1C7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CYSTM1Q9H1C7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC13.03□□□□□ -0.32
CYSTM1Q9H1C7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CYSTM1Q9H1C7 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CYSTM1Q9H1C7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CYSTM1Q9H1C7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CYSTM1Q9H1C7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC13.03□□□□□ -0.32
CYSTM1Q9H1C7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CYSTM1Q9H1C7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CYSTM1Q9H1C7 PCDHAC2-203ENST00000615316 3011 ntBASIC13.02□□□□□ -0.32
CYSTM1Q9H1C7 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CYSTM1Q9H1C7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CYSTM1Q9H1C7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CYSTM1Q9H1C7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
CYSTM1Q9H1C7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CYSTM1Q9H1C7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC13.02□□□□□ -0.33
CYSTM1Q9H1C7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CYSTM1Q9H1C7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CYSTM1Q9H1C7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CYSTM1Q9H1C7 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
CYSTM1Q9H1C7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CYSTM1Q9H1C7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC13.02□□□□□ -0.33
CYSTM1Q9H1C7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC13.02□□□□□ -0.33
CYSTM1Q9H1C7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC13.02□□□□□ -0.33
CYSTM1Q9H1C7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CYSTM1Q9H1C7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CYSTM1Q9H1C7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CYSTM1Q9H1C7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CYSTM1Q9H1C7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CYSTM1Q9H1C7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CYSTM1Q9H1C7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CYSTM1Q9H1C7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CYSTM1Q9H1C7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CYSTM1Q9H1C7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CYSTM1Q9H1C7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CYSTM1Q9H1C7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CYSTM1Q9H1C7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CYSTM1Q9H1C7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CYSTM1Q9H1C7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
CYSTM1Q9H1C7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CYSTM1Q9H1C7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CYSTM1Q9H1C7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CYSTM1Q9H1C7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
CYSTM1Q9H1C7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
CYSTM1Q9H1C7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CYSTM1Q9H1C7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CYSTM1Q9H1C7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CYSTM1Q9H1C7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CYSTM1Q9H1C7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CYSTM1Q9H1C7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CYSTM1Q9H1C7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CYSTM1Q9H1C7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CYSTM1Q9H1C7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CYSTM1Q9H1C7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
CYSTM1Q9H1C7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC13□□□□□ -0.33
CYSTM1Q9H1C7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC13□□□□□ -0.33
CYSTM1Q9H1C7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CYSTM1Q9H1C7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC13□□□□□ -0.33
CYSTM1Q9H1C7 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CYSTM1Q9H1C7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC13□□□□□ -0.33
CYSTM1Q9H1C7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms