Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALX4Q9H161 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALX4Q9H161 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALX4Q9H161 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALX4Q9H161 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALX4Q9H161 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ALX4Q9H161 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALX4Q9H161 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALX4Q9H161 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALX4Q9H161 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALX4Q9H161 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.67■□□□□ 0.58
ALX4Q9H161 MIR6765-201ENST00000614092 87 ntBASIC18.67■□□□□ 0.58
ALX4Q9H161 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.67■□□□□ 0.58
ALX4Q9H161 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ALX4Q9H161 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALX4Q9H161 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALX4Q9H161 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ALX4Q9H161 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALX4Q9H161 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALX4Q9H161 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALX4Q9H161 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ALX4Q9H161 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALX4Q9H161 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALX4Q9H161 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.66■□□□□ 0.58
ALX4Q9H161 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.66■□□□□ 0.58
ALX4Q9H161 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.66■□□□□ 0.58
ALX4Q9H161 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.66■□□□□ 0.58
ALX4Q9H161 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ALX4Q9H161 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ALX4Q9H161 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALX4Q9H161 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALX4Q9H161 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ALX4Q9H161 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALX4Q9H161 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALX4Q9H161 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.65■□□□□ 0.58
ALX4Q9H161 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALX4Q9H161 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALX4Q9H161 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ALX4Q9H161 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ALX4Q9H161 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
ALX4Q9H161 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.64■□□□□ 0.57
ALX4Q9H161 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.64■□□□□ 0.57
ALX4Q9H161 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ALX4Q9H161 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ALX4Q9H161 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ALX4Q9H161 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ALX4Q9H161 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ALX4Q9H161 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ALX4Q9H161 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ALX4Q9H161 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ALX4Q9H161 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.63■□□□□ 0.57
ALX4Q9H161 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
ALX4Q9H161 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
ALX4Q9H161 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.63■□□□□ 0.57
ALX4Q9H161 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ALX4Q9H161 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ALX4Q9H161 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ALX4Q9H161 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ALX4Q9H161 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.63■□□□□ 0.57
ALX4Q9H161 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.63■□□□□ 0.57
ALX4Q9H161 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ALX4Q9H161 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ALX4Q9H161 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
ALX4Q9H161 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ALX4Q9H161 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ALX4Q9H161 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ALX4Q9H161 FAM99A-202ENST00000538190 1989 ntBASIC18.62■□□□□ 0.57
ALX4Q9H161 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.62■□□□□ 0.57
ALX4Q9H161 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.62■□□□□ 0.57
ALX4Q9H161 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ALX4Q9H161 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ALX4Q9H161 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ALX4Q9H161 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.62■□□□□ 0.57
ALX4Q9H161 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ALX4Q9H161 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.62■□□□□ 0.57
ALX4Q9H161 BHLHE23-202ENST00000612929 1109 ntBASIC18.62■□□□□ 0.57
ALX4Q9H161 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.62■□□□□ 0.57
ALX4Q9H161 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ALX4Q9H161 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ALX4Q9H161 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.61■□□□□ 0.57
ALX4Q9H161 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ALX4Q9H161 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ALX4Q9H161 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ALX4Q9H161 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.61■□□□□ 0.57
ALX4Q9H161 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.61■□□□□ 0.57
ALX4Q9H161 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ALX4Q9H161 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.61■□□□□ 0.57
ALX4Q9H161 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ALX4Q9H161 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ALX4Q9H161 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ALX4Q9H161 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
ALX4Q9H161 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ALX4Q9H161 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.61■□□□□ 0.57
ALX4Q9H161 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.61■□□□□ 0.57
ALX4Q9H161 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ALX4Q9H161 RNF165-205ENST00000588679 2904 ntBASIC18.61■□□□□ 0.57
ALX4Q9H161 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.61■□□□□ 0.57
ALX4Q9H161 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ALX4Q9H161 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ALX4Q9H161 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms