Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 PDXK-216ENST00000481512 583 ntTSL 59.06□□□□□ -0.963e-7■■■■□ 24.6
CSTF2TQ9H0L4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.626e-8■■■■□ 24.6
CSTF2TQ9H0L4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.483e-6■■■■□ 24.6
CSTF2TQ9H0L4 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.353e-6■■■■□ 24.6
CSTF2TQ9H0L4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.5□□□□□ -0.098e-7■■■■□ 24.6
CSTF2TQ9H0L4 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.96□□□□□ -0.173e-6■■■■□ 24.6
CSTF2TQ9H0L4 SPIRE1-207ENST00000462226 536 ntTSL 47.99□□□□□ -1.133e-6■■■■□ 24.6
CSTF2TQ9H0L4 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7□□□□□ -1.293e-6■■■■□ 24.6
CSTF2TQ9H0L4 SPIRE1-210ENST00000497844 546 ntTSL 55.03□□□□□ -1.63e-6■■■■□ 24.6
CSTF2TQ9H0L4 SPIRE1-205ENST00000449797 701 ntTSL 35.03□□□□□ -1.63e-6■■■■□ 24.6
CSTF2TQ9H0L4 RIPOR1-208ENST00000562755 538 ntTSL 415.83■□□□□ 0.122e-6■■■■□ 24.6
CSTF2TQ9H0L4 RIPOR1-207ENST00000562116 244 ntTSL 315.27■□□□□ 0.042e-6■■■■□ 24.6
CSTF2TQ9H0L4 RIPOR1-213ENST00000566522 592 ntTSL 514.4□□□□□ -0.12e-6■■■■□ 24.6
CSTF2TQ9H0L4 RIPOR1-217ENST00000566907 634 ntTSL 411.92□□□□□ -0.52e-6■■■■□ 24.6
CSTF2TQ9H0L4 RIPOR1-202ENST00000379312 4116 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.572e-6■■■■□ 24.6
CSTF2TQ9H0L4 RIPOR1-205ENST00000540839 4260 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.62e-6■■■■□ 24.6
CSTF2TQ9H0L4 RIPOR1-201ENST00000042381 4051 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.722e-6■■■■□ 24.6
CSTF2TQ9H0L4 TCEA2-211ENST00000470559 296 ntTSL 512.52□□□□□ -0.415e-8■■■■□ 24.6
CSTF2TQ9H0L4 FOXK2-211ENST00000575578 571 ntTSL 213.36□□□□□ -0.272e-7■■■■□ 24.6
CSTF2TQ9H0L4 LINC00963-213ENST00000622120 355 ntTSL 511.75□□□□□ -0.537e-7■■■■□ 24.6
CSTF2TQ9H0L4 LINC00963-209ENST00000607931 473 ntTSL 58□□□□□ -1.137e-7■■■■□ 24.6
CSTF2TQ9H0L4 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.141e-7■■■■□ 24.6
CSTF2TQ9H0L4 MNT-206ENST00000574559 580 ntTSL 417.89■□□□□ 0.451e-6■■■■□ 24.6
CSTF2TQ9H0L4 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.436e-7■■■■□ 24.6
CSTF2TQ9H0L4 SARDH-207ENST00000439388 3216 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.526e-7■■■■□ 24.6
CSTF2TQ9H0L4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.738e-7■■■■□ 24.5
CSTF2TQ9H0L4 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.89■□□□□ 0.458e-7■■■■□ 24.5
CSTF2TQ9H0L4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.67□□□□□ -0.068e-7■■■■□ 24.5
CSTF2TQ9H0L4 PLEC-201ENST00000322810 15249 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.633e-7■■■■□ 24.5
CSTF2TQ9H0L4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.76■□□□□ 0.272e-6■■■■□ 24.5
CSTF2TQ9H0L4 ABR-236ENST00000577052 617 ntTSL 416.13■□□□□ 0.172e-6■■■■□ 24.5
CSTF2TQ9H0L4 ABR-234ENST00000576668 553 ntTSL 415.31■□□□□ 0.042e-6■■■■□ 24.5
CSTF2TQ9H0L4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.425e-8■■■■□ 24.5
CSTF2TQ9H0L4 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.115e-8■■■■□ 24.5
CSTF2TQ9H0L4 AKT1-208ENST00000554581 3916 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.595e-8■■■■□ 24.5
CSTF2TQ9H0L4 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.044e-7■■■■□ 24.5
CSTF2TQ9H0L4 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.134e-7■■■■□ 24.5
CSTF2TQ9H0L4 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.144e-7■■■■□ 24.5
CSTF2TQ9H0L4 MROH1-205ENST00000527552 5832 ntTSL 1 (best)12.42□□□□□ -0.424e-7■■■■□ 24.5
CSTF2TQ9H0L4 RIC8A-207ENST00000527468 571 ntTSL 218.68■□□□□ 0.583e-7■■■■□ 24.5
CSTF2TQ9H0L4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.45■□□□□ 0.223e-7■■■■□ 24.5
CSTF2TQ9H0L4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.123e-7■■■■□ 24.5
CSTF2TQ9H0L4 RIC8A-216ENST00000532373 620 ntTSL 315.36■□□□□ 0.053e-7■■■■□ 24.5
CSTF2TQ9H0L4 RIC8A-210ENST00000528357 500 ntTSL 414.65□□□□□ -0.063e-7■■■■□ 24.5
CSTF2TQ9H0L4 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.3□□□□□ -0.123e-7■■■■□ 24.5
CSTF2TQ9H0L4 RIC8A-205ENST00000526982 965 ntTSL 313.59□□□□□ -0.233e-7■■■■□ 24.5
CSTF2TQ9H0L4 RIC8A-213ENST00000530889 563 ntTSL 212.57□□□□□ -0.43e-7■■■■□ 24.5
CSTF2TQ9H0L4 RIC8A-203ENST00000526104 3703 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.513e-7■■■■□ 24.5
CSTF2TQ9H0L4 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC11.72□□□□□ -0.534e-7■■■■□ 24.5
CSTF2TQ9H0L4 PAX8-AS1-217ENST00000617509 627 ntTSL 4 BASIC10.68□□□□□ -0.74e-7■■■■□ 24.5
CSTF2TQ9H0L4 PAX8-AS1-207ENST00000451179 1196 ntTSL 1 (best)9.51□□□□□ -0.894e-7■■■■□ 24.5
CSTF2TQ9H0L4 PAX8-AS1-215ENST00000616073 512 ntTSL 49.04□□□□□ -0.964e-7■■■■□ 24.5
CSTF2TQ9H0L4 PAX8-AS1-201ENST00000333145 2319 ntTSL 2 BASIC7.87□□□□□ -1.154e-7■■■■□ 24.5
CSTF2TQ9H0L4 PAX8-AS1-210ENST00000553869 560 ntTSL 57.28□□□□□ -1.244e-7■■■■□ 24.5
CSTF2TQ9H0L4 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.8□□□□□ -1.324e-7■■■■□ 24.5
CSTF2TQ9H0L4 PAX8-AS1-212ENST00000556070 567 ntTSL 46.62□□□□□ -1.354e-7■■■■□ 24.5
CSTF2TQ9H0L4 PAX8-AS1-220ENST00000624706 434 ntTSL 53.45□□□□□ -1.864e-7■■■■□ 24.5
CSTF2TQ9H0L4 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.172e-7■■■■□ 24.5
CSTF2TQ9H0L4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.094e-7■■■■□ 24.5
CSTF2TQ9H0L4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.91□□□□□ -0.024e-7■■■■□ 24.5
CSTF2TQ9H0L4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.61□□□□□ -0.074e-7■■■■□ 24.5
CSTF2TQ9H0L4 CLPTM1L-214ENST00000513250 567 ntTSL 313.75□□□□□ -0.214e-7■■■■□ 24.5
CSTF2TQ9H0L4 CLPTM1L-203ENST00000503151 627 ntTSL 312.56□□□□□ -0.44e-7■■■■□ 24.5
CSTF2TQ9H0L4 CLPTM1L-210ENST00000508765 631 ntTSL 312.16□□□□□ -0.464e-7■■■■□ 24.5
CSTF2TQ9H0L4 CLPTM1L-202ENST00000503042 3540 ntTSL 210.04□□□□□ -0.84e-7■■■■□ 24.5
CSTF2TQ9H0L4 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.315e-9■■■■□ 24.5
CSTF2TQ9H0L4 AL121845.3-203ENST00000496820 507 ntTSL 521.93■■□□□ 1.15e-9■■■■□ 24.5
CSTF2TQ9H0L4 LIME1-203ENST00000465591 680 ntTSL 220.43■□□□□ 0.865e-9■■■■□ 24.5
CSTF2TQ9H0L4 LIME1-210ENST00000621325 2410 ntTSL 219.04■□□□□ 0.645e-9■■■■□ 24.5
CSTF2TQ9H0L4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.545e-9■■■■□ 24.5
CSTF2TQ9H0L4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.515e-9■■■■□ 24.5
CSTF2TQ9H0L4 LIME1-202ENST00000444951 451 ntAPPRIS ALT2 TSL 315.81■□□□□ 0.125e-9■■■■□ 24.5
CSTF2TQ9H0L4 TFDP1-203ENST00000453989 792 ntTSL 322.42■■□□□ 1.189e-7■■■■□ 24.5
CSTF2TQ9H0L4 TFDP1-202ENST00000408980 866 ntTSL 521.64■■□□□ 1.059e-7■■■■□ 24.5
CSTF2TQ9H0L4 TFDP1-208ENST00000544902 1571 ntTSL 220.55■□□□□ 0.889e-7■■■■□ 24.5
CSTF2TQ9H0L4 TFDP1-206ENST00000475254 804 ntTSL 317.52■□□□□ 0.49e-7■■■■□ 24.5
CSTF2TQ9H0L4 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.289e-7■■■■□ 24.5
CSTF2TQ9H0L4 TFDP1-205ENST00000465174 955 ntTSL 312.78□□□□□ -0.369e-7■■■■□ 24.5
CSTF2TQ9H0L4 UBE2J2-213ENST00000471154 336 ntTSL 54.27□□□□□ -1.735e-7■■■■□ 24.5
CSTF2TQ9H0L4 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.241e-10■■■■□ 24.5
CSTF2TQ9H0L4 PLEC-203ENST00000354589 14736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.742e-7■■■■□ 24.5
CSTF2TQ9H0L4 TNK2-220ENST00000486523 300 ntTSL 319.36■□□□□ 0.698e-7■■■■□ 24.5
CSTF2TQ9H0L4 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.371e-8■■■■□ 24.5
CSTF2TQ9H0L4 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.411e-8■■■■□ 24.5
CSTF2TQ9H0L4 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.421e-8■■■■□ 24.5
CSTF2TQ9H0L4 FAM122B-208ENST00000611027 1059 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.861e-8■■■■□ 24.5
CSTF2TQ9H0L4 FAM122B-207ENST00000493333 1078 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.981e-8■■■■□ 24.5
CSTF2TQ9H0L4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.795e-7■■■■□ 24.5
CSTF2TQ9H0L4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.965e-8■■■■□ 24.4
CSTF2TQ9H0L4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.825e-8■■■■□ 24.4
CSTF2TQ9H0L4 AKT1-202ENST00000402615 3913 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.765e-8■■■■□ 24.4
CSTF2TQ9H0L4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.08■■□□□ 1.451e-6■■■■□ 24.4
CSTF2TQ9H0L4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.24■□□□□ 0.511e-6■■■■□ 24.4
CSTF2TQ9H0L4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.361e-6■■■■□ 24.4
CSTF2TQ9H0L4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.63■□□□□ 0.251e-6■■■■□ 24.4
CSTF2TQ9H0L4 CALM3-213ENST00000602169 590 ntTSL 212.18□□□□□ -0.461e-6■■■■□ 24.4
CSTF2TQ9H0L4 CALM3-206ENST00000594523 540 ntTSL 4 BASIC11.66□□□□□ -0.541e-6■■■■□ 24.4
CSTF2TQ9H0L4 CALM3-203ENST00000477244 696 ntTSL 310.93□□□□□ -0.661e-6■■■■□ 24.4
CSTF2TQ9H0L4 CALM3-210ENST00000597868 927 ntTSL 310.09□□□□□ -0.791e-6■■■■□ 24.4
CSTF2TQ9H0L4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.89■□□□□ 0.453e-27■■■■□ 24.4
Retrieved 100 of 19,151 protein–RNA pairs in 210.5 ms