RNA–Protein interactions for RNA: ENST00000462226.1

SPIRE1-207, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 4

Gene SPIRE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-207ENST00000462226 AEBP2Q6ZN18 517 aaPredicted RBP27.49■■□□□ 1.99
SPIRE1-207ENST00000462226 CHIC1Q5VXU3 224 aa26.85■■□□□ 1.89
SPIRE1-207ENST00000462226 PHF23Q9BUL5 403 aaPredicted RBP23.51■■□□□ 1.35
SPIRE1-207ENST00000462226 SENP3Q9H4L4 574 aaPredicted RBP23.51■■□□□ 1.35
SPIRE1-207ENST00000462226 PLPPR3Q6T4P5 718 aa21.81■■□□□ 1.08
SPIRE1-207ENST00000462226 FOXD1Q16676 465 aa21.72■■□□□ 1.07
SPIRE1-207ENST00000462226 ADRA2BP18089 450 aa20.75■□□□□ 0.91
SPIRE1-207ENST00000462226 PPP6R1Q9UPN7 881 aa20.75■□□□□ 0.91
SPIRE1-207ENST00000462226 PIAS4Q8N2W9 510 aaPredicted RBP20.5■□□□□ 0.87
SPIRE1-207ENST00000462226 MSH5O43196 834 aa20.21■□□□□ 0.83
SPIRE1-207ENST00000462226 SCAF1Q9H7N4 1312 aaKnown RBP19.19■□□□□ 0.66
SPIRE1-207ENST00000462226 PPP4R3CPQ6ZMV5 832 aa19.14■□□□□ 0.65
SPIRE1-207ENST00000462226 MAPK8IP2Q13387 824 aaPredicted RBP18.82■□□□□ 0.6
SPIRE1-207ENST00000462226 NCBP3Q53F19 620 aaKnown RBP18.72■□□□□ 0.59
SPIRE1-207ENST00000462226 DMRT2Q9Y5R5 561 aa18.71■□□□□ 0.59
SPIRE1-207ENST00000462226 CNKSR2Q8WXI2 1034 aa18.69■□□□□ 0.58
SPIRE1-207ENST00000462226 KCNA4P22459 653 aa18.51■□□□□ 0.55
SPIRE1-207ENST00000462226 POTEDQ86YR6 584 aa18.48■□□□□ 0.55
SPIRE1-207ENST00000462226 RNF216Q9NWF9 866 aaPredicted RBP18.35■□□□□ 0.53
SPIRE1-207ENST00000462226 NPM3O75607 178 aaKnown RBP18.31■□□□□ 0.52
SPIRE1-207ENST00000462226 HOXD11P31277 338 aaPredicted RBP18.29■□□□□ 0.52
SPIRE1-207ENST00000462226 DNAJC5BQ9UF47 199 aa17.95■□□□□ 0.46
SPIRE1-207ENST00000462226 DCAF8L1A6NGE4 600 aa17.85■□□□□ 0.45
SPIRE1-207ENST00000462226 SLC4A1APQ9BWU0 796 aaKnown RBP17.67■□□□□ 0.42
SPIRE1-207ENST00000462226 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.42■□□□□ 0.38
SPIRE1-207ENST00000462226 SLC4A2P04920 1241 aa17.29■□□□□ 0.36
SPIRE1-207ENST00000462226 RNF39Q9H2S5 420 aa17.24■□□□□ 0.35
SPIRE1-207ENST00000462226 FOXD4L1Q9NU39 408 aa17.16■□□□□ 0.34
SPIRE1-207ENST00000462226 C1QBPQ07021 282 aaKnown RBP17.1■□□□□ 0.33
SPIRE1-207ENST00000462226 U3KPZ7 1027 aaPredicted RBP17.08■□□□□ 0.32
SPIRE1-207ENST00000462226 MYCNP04198 464 aaPredicted RBP17.01■□□□□ 0.31
SPIRE1-207ENST00000462226 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17■□□□□ 0.31
SPIRE1-207ENST00000462226 HNRNPUL2Q1KMD3 747 aaKnown RBP17■□□□□ 0.31
SPIRE1-207ENST00000462226 ZBTB22O15209 634 aa16.98■□□□□ 0.31
SPIRE1-207ENST00000462226 EHMT2Q96KQ7 1210 aa16.95■□□□□ 0.3
SPIRE1-207ENST00000462226 SAMD1Q6SPF0 538 aaPredicted RBP16.89■□□□□ 0.29
SPIRE1-207ENST00000462226 APLP2Q06481 763 aa16.88■□□□□ 0.29
SPIRE1-207ENST00000462226 NISCHQ9Y2I1 1504 aa16.87■□□□□ 0.29
SPIRE1-207ENST00000462226 CACNB1Q02641 598 aaPredicted RBP16.87■□□□□ 0.29
SPIRE1-207ENST00000462226 CSRNP3Q8WYN3 585 aa16.84■□□□□ 0.29
SPIRE1-207ENST00000462226 ATXN8OSP0DMR3 200 aa16.65■□□□□ 0.26
SPIRE1-207ENST00000462226 CAPN15O75808 1086 aa16.6■□□□□ 0.25
SPIRE1-207ENST00000462226 SPINK5Q9NQ38 1064 aaPredicted RBP16.59■□□□□ 0.25
SPIRE1-207ENST00000462226 ZNF219Q9P2Y4 722 aaPredicted RBP16.58■□□□□ 0.24
SPIRE1-207ENST00000462226 TRHP20396 242 aaPredicted RBP16.47■□□□□ 0.23
SPIRE1-207ENST00000462226 ATF5Q9Y2D1 282 aaPredicted RBP16.39■□□□□ 0.21
SPIRE1-207ENST00000462226 DSG3P32926 999 aa16.35■□□□□ 0.21
SPIRE1-207ENST00000462226 ABCB7O75027 752 aa16.2■□□□□ 0.18
SPIRE1-207ENST00000462226 POLA2Q14181 598 aa16.19■□□□□ 0.18
SPIRE1-207ENST00000462226 ZBTB12Q9Y330 459 aaPredicted RBP16.07■□□□□ 0.16
SPIRE1-207ENST00000462226 FBLN2P98095 1184 aa15.9■□□□□ 0.14
SPIRE1-207ENST00000462226 MKRN4PQ13434 485 aaPredicted RBP15.72■□□□□ 0.11
SPIRE1-207ENST00000462226 RBM42Q9BTD8 480 aaKnown RBP15.71■□□□□ 0.11
SPIRE1-207ENST00000462226 OSCARQ8IYS5 282 aa15.62■□□□□ 0.09
SPIRE1-207ENST00000462226 SPDYE2BA6NHP3 402 aa15.57■□□□□ 0.08
SPIRE1-207ENST00000462226 SPDYE6P0CI01 402 aa15.57■□□□□ 0.08
SPIRE1-207ENST00000462226 SPDYE2Q495Y8 402 aa15.57■□□□□ 0.08
SPIRE1-207ENST00000462226 AKT1S1Q96B36 256 aa15.44■□□□□ 0.06
SPIRE1-207ENST00000462226 ZNF692Q9BU19 519 aaPredicted RBP15.43■□□□□ 0.06
SPIRE1-207ENST00000462226 SPDYE4A6NLX3 237 aa15.38■□□□□ 0.05
SPIRE1-207ENST00000462226 SSUH2Q9Y2M2 353 aa15.38■□□□□ 0.05
SPIRE1-207ENST00000462226 FKBP8Q14318 412 aa15.25■□□□□ 0.03
SPIRE1-207ENST00000462226 REM2Q8IYK8 340 aaPredicted RBP15.22■□□□□ 0.03
SPIRE1-207ENST00000462226 PABPN1Q86U42 306 aaKnown RBP eCLIP15.2■□□□□ 0.02
SPIRE1-207ENST00000462226 PROM2Q8N271 834 aa15.13■□□□□ 0.01
SPIRE1-207ENST00000462226 SPDYE1Q8NFV5 336 aaPredicted RBP15.13■□□□□ 0.01
SPIRE1-207ENST00000462226 STAG3Q9UJ98 1225 aa15.05■□□□□ -0
SPIRE1-207ENST00000462226 PITPNM1O00562 1244 aa15.03■□□□□ -0
SPIRE1-207ENST00000462226 CHRDL2Q6WN34 429 aa15□□□□□ -0.01
SPIRE1-207ENST00000462226 CLEC11AQ9Y240 323 aa14.99□□□□□ -0.01
SPIRE1-207ENST00000462226 CCDC180Q9P1Z9 1646 aa14.92□□□□□ -0.02
SPIRE1-207ENST00000462226 PRR29P0C7W0 189 aa14.89□□□□□ -0.03
SPIRE1-207ENST00000462226 FBXO3Q9UK99 471 aa14.89□□□□□ -0.03
SPIRE1-207ENST00000462226 FXR2P51116 673 aaKnown RBP eCLIP14.81□□□□□ -0.04
SPIRE1-207ENST00000462226 PIP4P2Q8N4L2 257 aa14.75□□□□□ -0.05
SPIRE1-207ENST00000462226 PLEKHG5O94827 1062 aa14.67□□□□□ -0.06
SPIRE1-207ENST00000462226 PRKAR2AP13861 404 aaKnown RBP14.67□□□□□ -0.06
SPIRE1-207ENST00000462226 POTEHQ6S545 545 aa14.65□□□□□ -0.06
SPIRE1-207ENST00000462226 ABCC9O60706 1549 aa14.61□□□□□ -0.07
SPIRE1-207ENST00000462226 CREBZFQ9NS37 354 aa14.61□□□□□ -0.07
SPIRE1-207ENST00000462226 MIER1Q8N108 512 aa14.6□□□□□ -0.07
SPIRE1-207ENST00000462226 VASPP50552 380 aaPredicted RBP14.59□□□□□ -0.07
SPIRE1-207ENST00000462226 PLCD3Q8N3E9 789 aa14.59□□□□□ -0.07
SPIRE1-207ENST00000462226 CHADLQ6NUI6 762 aa14.57□□□□□ -0.08
SPIRE1-207ENST00000462226 ZBTB47Q9UFB7 747 aaPredicted RBP14.55□□□□□ -0.08
SPIRE1-207ENST00000462226 FARP1Q9Y4F1 1045 aaPredicted RBP14.51□□□□□ -0.09
SPIRE1-207ENST00000462226 NPM1P06748 294 aaKnown RBP eCLIP14.49□□□□□ -0.09
SPIRE1-207ENST00000462226 MNX1P50219 401 aaPredicted RBP14.44□□□□□ -0.1
SPIRE1-207ENST00000462226 KLHL34Q8N239 644 aa14.37□□□□□ -0.11
SPIRE1-207ENST00000462226 HAX1O00165 279 aa14.33□□□□□ -0.12
SPIRE1-207ENST00000462226 IFNLR1Q8IU57 520 aaPredicted RBP14.33□□□□□ -0.12
SPIRE1-207ENST00000462226 C19orf67A6NJJ6 358 aa14.3□□□□□ -0.12
SPIRE1-207ENST00000462226 PAK3O75914 559 aaPredicted RBP14.28□□□□□ -0.12
SPIRE1-207ENST00000462226 CD44P16070 742 aaKnown RBP14.26□□□□□ -0.13
SPIRE1-207ENST00000462226 SPOCK2Q92563 424 aa14.25□□□□□ -0.13
SPIRE1-207ENST00000462226 NUBP1P53384 320 aa14.22□□□□□ -0.13
SPIRE1-207ENST00000462226 FAM212AQ96EL1 285 aa14.18□□□□□ -0.14
SPIRE1-207ENST00000462226 DCAF8L2P0C7V8 631 aa14.17□□□□□ -0.14
SPIRE1-207ENST00000462226 RASEFQ8IZ41 740 aa14.16□□□□□ -0.14
SPIRE1-207ENST00000462226 ZRANB1Q9UGI0 708 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 199.8 ms