Protein–RNA interactions for Protein: Q9H089

LSG1, Large subunit GTPase 1 homolog, humanhuman

Known RBP Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1Q9H089 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
LSG1Q9H089 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.56■■□□□ 1.84
LSG1Q9H089 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
LSG1Q9H089 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26.56■■□□□ 1.84
LSG1Q9H089 AL356740.2-201ENST00000601559 647 ntBASIC26.56■■□□□ 1.84
LSG1Q9H089 AC009086.3-201ENST00000623486 1008 ntBASIC26.56■■□□□ 1.84
LSG1Q9H089 EP400NL-214ENST00000641289 2402 ntBASIC26.56■■□□□ 1.84
LSG1Q9H089 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
LSG1Q9H089 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
LSG1Q9H089 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
LSG1Q9H089 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC26.55■■□□□ 1.84
LSG1Q9H089 GTSE1-AS1-202ENST00000623117 1518 ntBASIC26.55■■□□□ 1.84
LSG1Q9H089 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
LSG1Q9H089 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
LSG1Q9H089 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
LSG1Q9H089 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
LSG1Q9H089 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC26.54■■□□□ 1.84
LSG1Q9H089 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
LSG1Q9H089 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
LSG1Q9H089 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
LSG1Q9H089 AC127496.7-201ENST00000625110 1798 ntBASIC26.54■■□□□ 1.84
LSG1Q9H089 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
LSG1Q9H089 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC26.54■■□□□ 1.84
LSG1Q9H089 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC26.54■■□□□ 1.84
LSG1Q9H089 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
LSG1Q9H089 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
LSG1Q9H089 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC26.53■■□□□ 1.84
LSG1Q9H089 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
LSG1Q9H089 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
LSG1Q9H089 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
LSG1Q9H089 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
LSG1Q9H089 AC006455.2-201ENST00000429931 906 ntBASIC26.53■■□□□ 1.84
LSG1Q9H089 AL499627.2-201ENST00000606283 725 ntBASIC26.53■■□□□ 1.84
LSG1Q9H089 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC26.53■■□□□ 1.84
LSG1Q9H089 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
LSG1Q9H089 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
LSG1Q9H089 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
LSG1Q9H089 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
LSG1Q9H089 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC26.53■■□□□ 1.84
LSG1Q9H089 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
LSG1Q9H089 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
LSG1Q9H089 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
LSG1Q9H089 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
LSG1Q9H089 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
LSG1Q9H089 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC26.52■■□□□ 1.84
LSG1Q9H089 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
LSG1Q9H089 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC26.52■■□□□ 1.84
LSG1Q9H089 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
LSG1Q9H089 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC26.52■■□□□ 1.84
LSG1Q9H089 AC004687.1-201ENST00000579003 1625 ntBASIC26.52■■□□□ 1.84
LSG1Q9H089 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
LSG1Q9H089 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.84
LSG1Q9H089 LSR-203ENST00000360798 1963 ntTSL 2 BASIC26.51■■□□□ 1.83
LSG1Q9H089 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
LSG1Q9H089 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC26.51■■□□□ 1.83
LSG1Q9H089 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
LSG1Q9H089 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
LSG1Q9H089 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
LSG1Q9H089 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
LSG1Q9H089 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC26.51■■□□□ 1.83
LSG1Q9H089 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
LSG1Q9H089 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
LSG1Q9H089 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
LSG1Q9H089 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
LSG1Q9H089 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
LSG1Q9H089 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC26.5■■□□□ 1.83
LSG1Q9H089 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
LSG1Q9H089 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
LSG1Q9H089 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
LSG1Q9H089 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC26.5■■□□□ 1.83
LSG1Q9H089 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
LSG1Q9H089 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC26.5■■□□□ 1.83
LSG1Q9H089 ECEL1P1-201ENST00000373592 1742 ntBASIC26.5■■□□□ 1.83
LSG1Q9H089 GATM-206ENST00000558336 1522 ntTSL 2 BASIC26.49■■□□□ 1.83
LSG1Q9H089 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC26.49■■□□□ 1.83
LSG1Q9H089 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
LSG1Q9H089 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
LSG1Q9H089 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
LSG1Q9H089 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC26.49■■□□□ 1.83
LSG1Q9H089 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.49■■□□□ 1.83
LSG1Q9H089 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.49■■□□□ 1.83
LSG1Q9H089 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC26.49■■□□□ 1.83
LSG1Q9H089 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
LSG1Q9H089 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
LSG1Q9H089 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
LSG1Q9H089 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
LSG1Q9H089 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC26.49■■□□□ 1.83
LSG1Q9H089 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC26.48■■□□□ 1.83
LSG1Q9H089 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
LSG1Q9H089 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
LSG1Q9H089 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
LSG1Q9H089 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC26.48■■□□□ 1.83
LSG1Q9H089 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
LSG1Q9H089 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
LSG1Q9H089 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
LSG1Q9H089 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC26.48■■□□□ 1.83
LSG1Q9H089 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
LSG1Q9H089 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC26.48■■□□□ 1.83
LSG1Q9H089 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
LSG1Q9H089 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms