Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VRK1Q99986 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
VRK1Q99986 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.38■□□□□ 0.69
VRK1Q99986 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VRK1Q99986 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
VRK1Q99986 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.38■□□□□ 0.69
VRK1Q99986 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.38■□□□□ 0.69
VRK1Q99986 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
VRK1Q99986 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
VRK1Q99986 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
VRK1Q99986 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
VRK1Q99986 AC106739.1-201ENST00000617035 715 ntBASIC19.38■□□□□ 0.69
VRK1Q99986 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.38■□□□□ 0.69
VRK1Q99986 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VRK1Q99986 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.37■□□□□ 0.69
VRK1Q99986 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
VRK1Q99986 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.37■□□□□ 0.69
VRK1Q99986 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
VRK1Q99986 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VRK1Q99986 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VRK1Q99986 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VRK1Q99986 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VRK1Q99986 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VRK1Q99986 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
VRK1Q99986 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VRK1Q99986 AL024507.2-201ENST00000606070 2574 ntBASIC19.37■□□□□ 0.69
VRK1Q99986 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VRK1Q99986 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VRK1Q99986 AL161729.1-201ENST00000604104 1402 ntBASIC19.36■□□□□ 0.69
VRK1Q99986 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
VRK1Q99986 AC135279.3-201ENST00000610945 1311 ntBASIC19.36■□□□□ 0.69
VRK1Q99986 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VRK1Q99986 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
VRK1Q99986 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VRK1Q99986 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
VRK1Q99986 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VRK1Q99986 DUX4L19-201ENST00000557448 1267 ntBASIC19.36■□□□□ 0.69
VRK1Q99986 AC133561.4-201ENST00000566112 224 ntBASIC19.36■□□□□ 0.69
VRK1Q99986 AC092171.4-201ENST00000609130 632 ntBASIC19.36■□□□□ 0.69
VRK1Q99986 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
VRK1Q99986 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
VRK1Q99986 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VRK1Q99986 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VRK1Q99986 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
VRK1Q99986 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VRK1Q99986 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.36■□□□□ 0.69
VRK1Q99986 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
VRK1Q99986 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VRK1Q99986 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
VRK1Q99986 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VRK1Q99986 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
VRK1Q99986 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.35■□□□□ 0.69
VRK1Q99986 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.35■□□□□ 0.69
VRK1Q99986 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
VRK1Q99986 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VRK1Q99986 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.35■□□□□ 0.69
VRK1Q99986 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VRK1Q99986 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VRK1Q99986 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
VRK1Q99986 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
VRK1Q99986 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
VRK1Q99986 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VRK1Q99986 AC233723.2-201ENST00000623798 2106 ntBASIC19.34■□□□□ 0.69
VRK1Q99986 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.34■□□□□ 0.69
VRK1Q99986 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.34■□□□□ 0.69
VRK1Q99986 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.34■□□□□ 0.69
VRK1Q99986 AC142381.2-201ENST00000566120 298 ntBASIC19.34■□□□□ 0.69
VRK1Q99986 SYT6-210ENST00000641643 1587 ntBASIC19.34■□□□□ 0.69
VRK1Q99986 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VRK1Q99986 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VRK1Q99986 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.34■□□□□ 0.69
VRK1Q99986 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.33■□□□□ 0.69
VRK1Q99986 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
VRK1Q99986 AC009102.2-201ENST00000606772 1639 ntBASIC19.33■□□□□ 0.69
VRK1Q99986 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
VRK1Q99986 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.33■□□□□ 0.69
VRK1Q99986 AC024257.2-201ENST00000549699 147 ntBASIC19.33■□□□□ 0.68
VRK1Q99986 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.33■□□□□ 0.68
VRK1Q99986 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VRK1Q99986 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VRK1Q99986 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
VRK1Q99986 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VRK1Q99986 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VRK1Q99986 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.32■□□□□ 0.68
VRK1Q99986 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.32■□□□□ 0.68
VRK1Q99986 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
VRK1Q99986 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VRK1Q99986 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.32■□□□□ 0.68
VRK1Q99986 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
VRK1Q99986 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VRK1Q99986 AC099791.2-201ENST00000605725 427 ntBASIC19.32■□□□□ 0.68
VRK1Q99986 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VRK1Q99986 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.32■□□□□ 0.68
VRK1Q99986 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
VRK1Q99986 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VRK1Q99986 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.31■□□□□ 0.68
VRK1Q99986 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VRK1Q99986 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VRK1Q99986 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VRK1Q99986 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms