Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC14.79□□□□□ -0.04
LITAFQ99732 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LITAFQ99732 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LITAFQ99732 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LITAFQ99732 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LITAFQ99732 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
LITAFQ99732 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LITAFQ99732 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LITAFQ99732 AL353803.4-201ENST00000565882 1934 ntBASIC14.78□□□□□ -0.04
LITAFQ99732 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LITAFQ99732 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LITAFQ99732 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LITAFQ99732 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LITAFQ99732 RP9P-202ENST00000450133 1212 ntBASIC14.78□□□□□ -0.04
LITAFQ99732 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC14.78□□□□□ -0.04
LITAFQ99732 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
LITAFQ99732 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
LITAFQ99732 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
LITAFQ99732 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LITAFQ99732 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LITAFQ99732 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
LITAFQ99732 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LITAFQ99732 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LITAFQ99732 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
LITAFQ99732 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LITAFQ99732 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LITAFQ99732 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LITAFQ99732 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LITAFQ99732 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC14.77□□□□□ -0.05
LITAFQ99732 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC14.77□□□□□ -0.05
LITAFQ99732 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LITAFQ99732 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
LITAFQ99732 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
LITAFQ99732 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LITAFQ99732 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LITAFQ99732 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
LITAFQ99732 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC14.77□□□□□ -0.05
LITAFQ99732 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LITAFQ99732 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
LITAFQ99732 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LITAFQ99732 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC14.76□□□□□ -0.05
LITAFQ99732 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LITAFQ99732 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LITAFQ99732 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC14.76□□□□□ -0.05
LITAFQ99732 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LITAFQ99732 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC14.76□□□□□ -0.05
LITAFQ99732 AC093536.1-201ENST00000569153 554 ntBASIC14.76□□□□□ -0.05
LITAFQ99732 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LITAFQ99732 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC14.76□□□□□ -0.05
LITAFQ99732 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
LITAFQ99732 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC14.76□□□□□ -0.05
LITAFQ99732 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LITAFQ99732 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
LITAFQ99732 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LITAFQ99732 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LITAFQ99732 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
LITAFQ99732 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC14.76□□□□□ -0.05
LITAFQ99732 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC14.75□□□□□ -0.05
LITAFQ99732 PKD1P6-201ENST00000343738 4769 ntBASIC14.75□□□□□ -0.05
LITAFQ99732 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC14.75□□□□□ -0.05
LITAFQ99732 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC14.75□□□□□ -0.05
LITAFQ99732 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LITAFQ99732 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC14.75□□□□□ -0.05
LITAFQ99732 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC14.75□□□□□ -0.05
LITAFQ99732 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LITAFQ99732 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LITAFQ99732 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
LITAFQ99732 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
LITAFQ99732 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LITAFQ99732 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LITAFQ99732 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LITAFQ99732 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
LITAFQ99732 AC007952.6-201ENST00000573168 2673 ntBASIC14.74□□□□□ -0.05
LITAFQ99732 AC003957.1-201ENST00000625108 2673 ntBASIC14.74□□□□□ -0.05
LITAFQ99732 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LITAFQ99732 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LITAFQ99732 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LITAFQ99732 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC14.74□□□□□ -0.05
LITAFQ99732 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LITAFQ99732 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LITAFQ99732 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LITAFQ99732 AC131274.2-201ENST00000580697 1507 ntBASIC14.74□□□□□ -0.05
LITAFQ99732 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LITAFQ99732 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LITAFQ99732 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LITAFQ99732 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LITAFQ99732 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LITAFQ99732 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LITAFQ99732 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LITAFQ99732 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LITAFQ99732 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
LITAFQ99732 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
LITAFQ99732 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC14.73□□□□□ -0.05
LITAFQ99732 REST-210ENST00000638187 1334 ntTSL 5 BASIC14.73□□□□□ -0.05
LITAFQ99732 AC060814.1-201ENST00000554326 538 ntBASIC14.73□□□□□ -0.05
LITAFQ99732 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LITAFQ99732 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LITAFQ99732 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LITAFQ99732 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC14.73□□□□□ -0.05
LITAFQ99732 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms