Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC16.15■□□□□ 0.18
MUC4Q99102 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
MUC4Q99102 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
MUC4Q99102 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
MUC4Q99102 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
MUC4Q99102 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC16.15■□□□□ 0.18
MUC4Q99102 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC16.15■□□□□ 0.18
MUC4Q99102 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MUC4Q99102 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MUC4Q99102 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
MUC4Q99102 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC16.14■□□□□ 0.17
MUC4Q99102 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
MUC4Q99102 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
MUC4Q99102 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MUC4Q99102 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC16.14■□□□□ 0.17
MUC4Q99102 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
MUC4Q99102 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
MUC4Q99102 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC16.14■□□□□ 0.17
MUC4Q99102 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC16.14■□□□□ 0.17
MUC4Q99102 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16.14■□□□□ 0.17
MUC4Q99102 AC144652.1-201ENST00000609974 1624 ntBASIC16.14■□□□□ 0.17
MUC4Q99102 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
MUC4Q99102 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MUC4Q99102 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
MUC4Q99102 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MUC4Q99102 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
MUC4Q99102 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MUC4Q99102 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
MUC4Q99102 ESRRAP2-201ENST00000418437 1549 ntBASIC16.13■□□□□ 0.17
MUC4Q99102 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MUC4Q99102 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
MUC4Q99102 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MUC4Q99102 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
MUC4Q99102 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC16.13■□□□□ 0.17
MUC4Q99102 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC16.13■□□□□ 0.17
MUC4Q99102 AC092028.1-203ENST00000608262 953 ntBASIC16.13■□□□□ 0.17
MUC4Q99102 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MUC4Q99102 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
MUC4Q99102 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MUC4Q99102 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
MUC4Q99102 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MUC4Q99102 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
MUC4Q99102 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
MUC4Q99102 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC16.13■□□□□ 0.17
MUC4Q99102 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC16.13■□□□□ 0.17
MUC4Q99102 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
MUC4Q99102 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MUC4Q99102 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC16.13■□□□□ 0.17
MUC4Q99102 RNF146-205ENST00000477776 762 ntTSL 3 BASIC16.13■□□□□ 0.17
MUC4Q99102 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC16.13■□□□□ 0.17
MUC4Q99102 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MUC4Q99102 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC16.12■□□□□ 0.17
MUC4Q99102 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
MUC4Q99102 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC16.12■□□□□ 0.17
MUC4Q99102 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC16.12■□□□□ 0.17
MUC4Q99102 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
MUC4Q99102 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MUC4Q99102 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MUC4Q99102 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MUC4Q99102 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
MUC4Q99102 AC239859.2-201ENST00000444165 318 ntBASIC16.11■□□□□ 0.17
MUC4Q99102 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC16.11■□□□□ 0.17
MUC4Q99102 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC16.11■□□□□ 0.17
MUC4Q99102 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
MUC4Q99102 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MUC4Q99102 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
MUC4Q99102 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MUC4Q99102 REST-206ENST00000612429 1376 ntTSL 5 BASIC16.11■□□□□ 0.17
MUC4Q99102 REST-207ENST00000616975 1370 ntTSL 5 BASIC16.11■□□□□ 0.17
MUC4Q99102 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MUC4Q99102 AC092053.2-201ENST00000640557 1818 ntBASIC16.11■□□□□ 0.17
MUC4Q99102 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MUC4Q99102 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MUC4Q99102 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC16.11■□□□□ 0.17
MUC4Q99102 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MUC4Q99102 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC16.11■□□□□ 0.17
MUC4Q99102 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MUC4Q99102 AC007375.3-201ENST00000600936 2314 ntBASIC16.11■□□□□ 0.17
MUC4Q99102 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MUC4Q99102 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MUC4Q99102 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC16.1■□□□□ 0.17
MUC4Q99102 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
MUC4Q99102 GRAMD4P7-201ENST00000578182 1232 ntBASIC16.1■□□□□ 0.17
MUC4Q99102 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MUC4Q99102 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MUC4Q99102 AC087742.1-201ENST00000575880 1738 ntBASIC16.1■□□□□ 0.17
MUC4Q99102 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC16.1■□□□□ 0.17
MUC4Q99102 AC080038.3-201ENST00000623346 1952 ntBASIC16.1■□□□□ 0.17
MUC4Q99102 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MUC4Q99102 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
MUC4Q99102 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MUC4Q99102 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
MUC4Q99102 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC16.1■□□□□ 0.17
MUC4Q99102 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MUC4Q99102 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
MUC4Q99102 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MUC4Q99102 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MUC4Q99102 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MUC4Q99102 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
MUC4Q99102 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms