Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BBS4Q96RK4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.92■□□□□ 0.94
BBS4Q96RK4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BBS4Q96RK4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BBS4Q96RK4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BBS4Q96RK4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BBS4Q96RK4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.92■□□□□ 0.94
BBS4Q96RK4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
BBS4Q96RK4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
BBS4Q96RK4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
BBS4Q96RK4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
BBS4Q96RK4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BBS4Q96RK4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
BBS4Q96RK4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
BBS4Q96RK4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
BBS4Q96RK4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BBS4Q96RK4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BBS4Q96RK4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
BBS4Q96RK4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.91■□□□□ 0.94
BBS4Q96RK4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.91■□□□□ 0.94
BBS4Q96RK4 AC009086.3-201ENST00000623486 1008 ntBASIC20.91■□□□□ 0.94
BBS4Q96RK4 AC233723.2-201ENST00000623798 2106 ntBASIC20.91■□□□□ 0.94
BBS4Q96RK4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BBS4Q96RK4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.9■□□□□ 0.94
BBS4Q96RK4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.9■□□□□ 0.94
BBS4Q96RK4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
BBS4Q96RK4 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BBS4Q96RK4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BBS4Q96RK4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
BBS4Q96RK4 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BBS4Q96RK4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BBS4Q96RK4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BBS4Q96RK4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
BBS4Q96RK4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.89■□□□□ 0.94
BBS4Q96RK4 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
BBS4Q96RK4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
BBS4Q96RK4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
BBS4Q96RK4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BBS4Q96RK4 AL356441.2-201ENST00000443009 864 ntBASIC20.89■□□□□ 0.93
BBS4Q96RK4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
BBS4Q96RK4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BBS4Q96RK4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
BBS4Q96RK4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
BBS4Q96RK4 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
BBS4Q96RK4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
BBS4Q96RK4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
BBS4Q96RK4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
BBS4Q96RK4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BBS4Q96RK4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
BBS4Q96RK4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.89■□□□□ 0.93
BBS4Q96RK4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
BBS4Q96RK4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BBS4Q96RK4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BBS4Q96RK4 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BBS4Q96RK4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
BBS4Q96RK4 MIR3621-201ENST00000580529 85 ntBASIC20.88■□□□□ 0.93
BBS4Q96RK4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BBS4Q96RK4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
BBS4Q96RK4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BBS4Q96RK4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BBS4Q96RK4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BBS4Q96RK4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BBS4Q96RK4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
BBS4Q96RK4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BBS4Q96RK4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
BBS4Q96RK4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
BBS4Q96RK4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
BBS4Q96RK4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
BBS4Q96RK4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.87■□□□□ 0.93
BBS4Q96RK4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.87■□□□□ 0.93
BBS4Q96RK4 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
BBS4Q96RK4 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BBS4Q96RK4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.87■□□□□ 0.93
BBS4Q96RK4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.87■□□□□ 0.93
BBS4Q96RK4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
BBS4Q96RK4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
BBS4Q96RK4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BBS4Q96RK4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.86■□□□□ 0.93
BBS4Q96RK4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
BBS4Q96RK4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
BBS4Q96RK4 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
BBS4Q96RK4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.86■□□□□ 0.93
BBS4Q96RK4 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.86■□□□□ 0.93
BBS4Q96RK4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BBS4Q96RK4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BBS4Q96RK4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
BBS4Q96RK4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
BBS4Q96RK4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.85■□□□□ 0.93
BBS4Q96RK4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BBS4Q96RK4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
BBS4Q96RK4 ESRRAP2-201ENST00000418437 1549 ntBASIC20.85■□□□□ 0.93
BBS4Q96RK4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
BBS4Q96RK4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BBS4Q96RK4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
BBS4Q96RK4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
BBS4Q96RK4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BBS4Q96RK4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BBS4Q96RK4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
BBS4Q96RK4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BBS4Q96RK4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms