Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.96■■□□□ 1.11
PTCD3Q96EY7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.96■■□□□ 1.11
PTCD3Q96EY7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PTCD3Q96EY7 SNX5-217ENST00000606557 1087 ntBASIC21.96■■□□□ 1.11
PTCD3Q96EY7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PTCD3Q96EY7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PTCD3Q96EY7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.96■■□□□ 1.11
PTCD3Q96EY7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
PTCD3Q96EY7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.95■■□□□ 1.1
PTCD3Q96EY7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PTCD3Q96EY7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PTCD3Q96EY7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
PTCD3Q96EY7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.95■■□□□ 1.1
PTCD3Q96EY7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.95■■□□□ 1.1
PTCD3Q96EY7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
PTCD3Q96EY7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PTCD3Q96EY7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.95■■□□□ 1.1
PTCD3Q96EY7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PTCD3Q96EY7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.95■■□□□ 1.1
PTCD3Q96EY7 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PTCD3Q96EY7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PTCD3Q96EY7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
PTCD3Q96EY7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.94■■□□□ 1.1
PTCD3Q96EY7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
PTCD3Q96EY7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PTCD3Q96EY7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.94■■□□□ 1.1
PTCD3Q96EY7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PTCD3Q96EY7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
PTCD3Q96EY7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PTCD3Q96EY7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PTCD3Q96EY7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.94■■□□□ 1.1
PTCD3Q96EY7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.94■■□□□ 1.1
PTCD3Q96EY7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
PTCD3Q96EY7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PTCD3Q96EY7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PTCD3Q96EY7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PTCD3Q96EY7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PTCD3Q96EY7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PTCD3Q96EY7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PTCD3Q96EY7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PTCD3Q96EY7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
PTCD3Q96EY7 Z92544.1-202ENST00000571933 1220 ntBASIC21.93■■□□□ 1.1
PTCD3Q96EY7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PTCD3Q96EY7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
PTCD3Q96EY7 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PTCD3Q96EY7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PTCD3Q96EY7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.93■■□□□ 1.1
PTCD3Q96EY7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PTCD3Q96EY7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
PTCD3Q96EY7 AC139530.1-201ENST00000575312 1977 ntBASIC21.92■■□□□ 1.1
PTCD3Q96EY7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
PTCD3Q96EY7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
PTCD3Q96EY7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
PTCD3Q96EY7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.92■■□□□ 1.1
PTCD3Q96EY7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.92■■□□□ 1.1
PTCD3Q96EY7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PTCD3Q96EY7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PTCD3Q96EY7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.92■■□□□ 1.1
PTCD3Q96EY7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PTCD3Q96EY7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.91■■□□□ 1.1
PTCD3Q96EY7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PTCD3Q96EY7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PTCD3Q96EY7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
PTCD3Q96EY7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PTCD3Q96EY7 C11orf96-202ENST00000528572 1834 ntBASIC21.91■■□□□ 1.1
PTCD3Q96EY7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PTCD3Q96EY7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PTCD3Q96EY7 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
PTCD3Q96EY7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
PTCD3Q96EY7 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.9■■□□□ 1.1
PTCD3Q96EY7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
PTCD3Q96EY7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
PTCD3Q96EY7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PTCD3Q96EY7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PTCD3Q96EY7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PTCD3Q96EY7 KRT125P-201ENST00000546827 989 ntBASIC21.9■■□□□ 1.1
PTCD3Q96EY7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PTCD3Q96EY7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PTCD3Q96EY7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PTCD3Q96EY7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.9■■□□□ 1.1
PTCD3Q96EY7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.9■■□□□ 1.1
PTCD3Q96EY7 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.89■■□□□ 1.1
PTCD3Q96EY7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
PTCD3Q96EY7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.89■■□□□ 1.09
PTCD3Q96EY7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.89■■□□□ 1.09
PTCD3Q96EY7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.89■■□□□ 1.09
PTCD3Q96EY7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
PTCD3Q96EY7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PTCD3Q96EY7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PTCD3Q96EY7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PTCD3Q96EY7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PTCD3Q96EY7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PTCD3Q96EY7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
PTCD3Q96EY7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.88■■□□□ 1.09
PTCD3Q96EY7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.88■■□□□ 1.09
PTCD3Q96EY7 AC009299.2-201ENST00000482477 511 ntBASIC21.88■■□□□ 1.09
PTCD3Q96EY7 AL451085.2-201ENST00000605085 799 ntBASIC21.88■■□□□ 1.09
PTCD3Q96EY7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.88■■□□□ 1.09
PTCD3Q96EY7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.88■■□□□ 1.09
PTCD3Q96EY7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms