Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.2■■□□□ 1.3
RNF25Q96BH1 AC009299.2-201ENST00000482477 511 ntBASIC23.2■■□□□ 1.3
RNF25Q96BH1 AL451085.2-201ENST00000605085 799 ntBASIC23.2■■□□□ 1.3
RNF25Q96BH1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.2■■□□□ 1.3
RNF25Q96BH1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RNF25Q96BH1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.2■■□□□ 1.3
RNF25Q96BH1 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF25Q96BH1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.19■■□□□ 1.3
RNF25Q96BH1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.19■■□□□ 1.3
RNF25Q96BH1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RNF25Q96BH1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF25Q96BH1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
RNF25Q96BH1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.19■■□□□ 1.3
RNF25Q96BH1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF25Q96BH1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF25Q96BH1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF25Q96BH1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF25Q96BH1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.19■■□□□ 1.3
RNF25Q96BH1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
RNF25Q96BH1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF25Q96BH1 WWC2-AS2-201ENST00000578387 2183 ntBASIC23.18■■□□□ 1.3
RNF25Q96BH1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.18■■□□□ 1.3
RNF25Q96BH1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.18■■□□□ 1.3
RNF25Q96BH1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
RNF25Q96BH1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF25Q96BH1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RNF25Q96BH1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
RNF25Q96BH1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
RNF25Q96BH1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.18■■□□□ 1.3
RNF25Q96BH1 MTDHP2-201ENST00000601468 714 ntBASIC23.18■■□□□ 1.3
RNF25Q96BH1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RNF25Q96BH1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF25Q96BH1 AC127496.7-201ENST00000625110 1798 ntBASIC23.18■■□□□ 1.3
RNF25Q96BH1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
RNF25Q96BH1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF25Q96BH1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF25Q96BH1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.18■■□□□ 1.3
RNF25Q96BH1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RNF25Q96BH1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
RNF25Q96BH1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RNF25Q96BH1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RNF25Q96BH1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
RNF25Q96BH1 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.17■■□□□ 1.3
RNF25Q96BH1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.17■■□□□ 1.3
RNF25Q96BH1 TSPY9P-201ENST00000440215 945 ntBASIC23.17■■□□□ 1.3
RNF25Q96BH1 TSPY11P-201ENST00000442607 1045 ntBASIC23.17■■□□□ 1.3
RNF25Q96BH1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RNF25Q96BH1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
RNF25Q96BH1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RNF25Q96BH1 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
RNF25Q96BH1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RNF25Q96BH1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.16■■□□□ 1.3
RNF25Q96BH1 AC137767.1-201ENST00000602918 1920 ntBASIC23.16■■□□□ 1.3
RNF25Q96BH1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.16■■□□□ 1.3
RNF25Q96BH1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.16■■□□□ 1.3
RNF25Q96BH1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.16■■□□□ 1.3
RNF25Q96BH1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RNF25Q96BH1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RNF25Q96BH1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RNF25Q96BH1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
RNF25Q96BH1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RNF25Q96BH1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RNF25Q96BH1 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RNF25Q96BH1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.15■■□□□ 1.3
RNF25Q96BH1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
RNF25Q96BH1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
RNF25Q96BH1 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.15■■□□□ 1.3
RNF25Q96BH1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RNF25Q96BH1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RNF25Q96BH1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
RNF25Q96BH1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RNF25Q96BH1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.3
RNF25Q96BH1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.14■■□□□ 1.3
RNF25Q96BH1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.14■■□□□ 1.3
RNF25Q96BH1 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
RNF25Q96BH1 LINC01529-204ENST00000636474 1715 ntBASIC23.14■■□□□ 1.3
RNF25Q96BH1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
RNF25Q96BH1 AC010997.5-201ENST00000609182 354 ntBASIC23.14■■□□□ 1.29
RNF25Q96BH1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.14■■□□□ 1.29
RNF25Q96BH1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RNF25Q96BH1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
RNF25Q96BH1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RNF25Q96BH1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.13■■□□□ 1.29
RNF25Q96BH1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.13■■□□□ 1.29
RNF25Q96BH1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RNF25Q96BH1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RNF25Q96BH1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RNF25Q96BH1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.13■■□□□ 1.29
RNF25Q96BH1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RNF25Q96BH1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.13■■□□□ 1.29
RNF25Q96BH1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.13■■□□□ 1.29
RNF25Q96BH1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RNF25Q96BH1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RNF25Q96BH1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
RNF25Q96BH1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RNF25Q96BH1 ESRRAP2-201ENST00000418437 1549 ntBASIC23.13■■□□□ 1.29
RNF25Q96BH1 AC007375.3-201ENST00000600936 2314 ntBASIC23.13■■□□□ 1.29
RNF25Q96BH1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RNF25Q96BH1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RNF25Q96BH1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms