Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFT1Q96AA3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RFT1Q96AA3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.5■□□□□ 0.71
RFT1Q96AA3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.5■□□□□ 0.71
RFT1Q96AA3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RFT1Q96AA3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFT1Q96AA3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.5■□□□□ 0.71
RFT1Q96AA3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFT1Q96AA3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.5■□□□□ 0.71
RFT1Q96AA3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
RFT1Q96AA3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.49■□□□□ 0.71
RFT1Q96AA3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.49■□□□□ 0.71
RFT1Q96AA3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.49■□□□□ 0.71
RFT1Q96AA3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.49■□□□□ 0.71
RFT1Q96AA3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFT1Q96AA3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFT1Q96AA3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.49■□□□□ 0.71
RFT1Q96AA3 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.49■□□□□ 0.71
RFT1Q96AA3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.49■□□□□ 0.71
RFT1Q96AA3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFT1Q96AA3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.49■□□□□ 0.71
RFT1Q96AA3 AC022616.5-201ENST00000518796 181 ntBASIC19.49■□□□□ 0.71
RFT1Q96AA3 AC120024.1-201ENST00000562672 995 ntBASIC19.49■□□□□ 0.71
RFT1Q96AA3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RFT1Q96AA3 AC019171.1-201ENST00000601251 1056 ntBASIC19.49■□□□□ 0.71
RFT1Q96AA3 PVT1_1.1-201ENST00000615125 194 ntBASIC19.49■□□□□ 0.71
RFT1Q96AA3 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
RFT1Q96AA3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.49■□□□□ 0.71
RFT1Q96AA3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RFT1Q96AA3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RFT1Q96AA3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFT1Q96AA3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RFT1Q96AA3 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.49■□□□□ 0.71
RFT1Q96AA3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.48■□□□□ 0.71
RFT1Q96AA3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFT1Q96AA3 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFT1Q96AA3 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFT1Q96AA3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFT1Q96AA3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFT1Q96AA3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
RFT1Q96AA3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RFT1Q96AA3 AC010980.1-201ENST00000587192 1142 ntBASIC19.48■□□□□ 0.71
RFT1Q96AA3 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFT1Q96AA3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RFT1Q96AA3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.48■□□□□ 0.71
RFT1Q96AA3 ALDH1A3-203ENST00000557963 1670 ntBASIC19.48■□□□□ 0.71
RFT1Q96AA3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFT1Q96AA3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFT1Q96AA3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.48■□□□□ 0.71
RFT1Q96AA3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFT1Q96AA3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFT1Q96AA3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFT1Q96AA3 C11orf96-202ENST00000528572 1834 ntBASIC19.47■□□□□ 0.71
RFT1Q96AA3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.47■□□□□ 0.71
RFT1Q96AA3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.47■□□□□ 0.71
RFT1Q96AA3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFT1Q96AA3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFT1Q96AA3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RFT1Q96AA3 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFT1Q96AA3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFT1Q96AA3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RFT1Q96AA3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
RFT1Q96AA3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
RFT1Q96AA3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
RFT1Q96AA3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFT1Q96AA3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFT1Q96AA3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RFT1Q96AA3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RFT1Q96AA3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RFT1Q96AA3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFT1Q96AA3 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFT1Q96AA3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFT1Q96AA3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.46■□□□□ 0.71
RFT1Q96AA3 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.46■□□□□ 0.71
RFT1Q96AA3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RFT1Q96AA3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
RFT1Q96AA3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFT1Q96AA3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFT1Q96AA3 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFT1Q96AA3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RFT1Q96AA3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RFT1Q96AA3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFT1Q96AA3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RFT1Q96AA3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.45■□□□□ 0.7
RFT1Q96AA3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
RFT1Q96AA3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.45■□□□□ 0.7
RFT1Q96AA3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.45■□□□□ 0.7
RFT1Q96AA3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RFT1Q96AA3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFT1Q96AA3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RFT1Q96AA3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFT1Q96AA3 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFT1Q96AA3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RFT1Q96AA3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFT1Q96AA3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFT1Q96AA3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RFT1Q96AA3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
RFT1Q96AA3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.44■□□□□ 0.7
RFT1Q96AA3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFT1Q96AA3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms