Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC24.84■■□□□ 1.57
ATP6V0A1Q93050 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
ATP6V0A1Q93050 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC24.84■■□□□ 1.57
ATP6V0A1Q93050 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
ATP6V0A1Q93050 ANOS2P-203ENST00000472227 1816 ntBASIC24.84■■□□□ 1.57
ATP6V0A1Q93050 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24.83■■□□□ 1.57
ATP6V0A1Q93050 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
ATP6V0A1Q93050 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC24.83■■□□□ 1.57
ATP6V0A1Q93050 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
ATP6V0A1Q93050 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
ATP6V0A1Q93050 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
ATP6V0A1Q93050 NME4-202ENST00000382940 766 ntTSL 3 BASIC24.83■■□□□ 1.57
ATP6V0A1Q93050 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
ATP6V0A1Q93050 NME4-211ENST00000620944 1193 ntTSL 2 BASIC24.83■■□□□ 1.57
ATP6V0A1Q93050 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
ATP6V0A1Q93050 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
ATP6V0A1Q93050 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC24.83■■□□□ 1.56
ATP6V0A1Q93050 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
ATP6V0A1Q93050 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
ATP6V0A1Q93050 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC24.82■■□□□ 1.56
ATP6V0A1Q93050 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC24.82■■□□□ 1.56
ATP6V0A1Q93050 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
ATP6V0A1Q93050 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC24.82■■□□□ 1.56
ATP6V0A1Q93050 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
ATP6V0A1Q93050 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC24.82■■□□□ 1.56
ATP6V0A1Q93050 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC24.82■■□□□ 1.56
ATP6V0A1Q93050 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC24.81■■□□□ 1.56
ATP6V0A1Q93050 AC092068.2-201ENST00000590491 1708 ntBASIC24.81■■□□□ 1.56
ATP6V0A1Q93050 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
ATP6V0A1Q93050 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
ATP6V0A1Q93050 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
ATP6V0A1Q93050 OR2I1P-207ENST00000453522 948 ntBASIC24.81■■□□□ 1.56
ATP6V0A1Q93050 IGHV3-19-201ENST00000521488 291 ntBASIC24.81■■□□□ 1.56
ATP6V0A1Q93050 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC24.81■■□□□ 1.56
ATP6V0A1Q93050 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC24.81■■□□□ 1.56
ATP6V0A1Q93050 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC24.81■■□□□ 1.56
ATP6V0A1Q93050 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
ATP6V0A1Q93050 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC24.81■■□□□ 1.56
ATP6V0A1Q93050 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.8■■□□□ 1.56
ATP6V0A1Q93050 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
ATP6V0A1Q93050 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC24.8■■□□□ 1.56
ATP6V0A1Q93050 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
ATP6V0A1Q93050 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.8■■□□□ 1.56
ATP6V0A1Q93050 AC034268.1-201ENST00000441047 882 ntBASIC24.8■■□□□ 1.56
ATP6V0A1Q93050 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC24.8■■□□□ 1.56
ATP6V0A1Q93050 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC24.8■■□□□ 1.56
ATP6V0A1Q93050 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
ATP6V0A1Q93050 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
ATP6V0A1Q93050 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
ATP6V0A1Q93050 YBX1P1-201ENST00000445822 960 ntBASIC24.79■■□□□ 1.56
ATP6V0A1Q93050 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
ATP6V0A1Q93050 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
ATP6V0A1Q93050 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC24.78■■□□□ 1.56
ATP6V0A1Q93050 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC24.78■■□□□ 1.56
ATP6V0A1Q93050 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
ATP6V0A1Q93050 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
ATP6V0A1Q93050 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.78■■□□□ 1.56
ATP6V0A1Q93050 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC24.78■■□□□ 1.56
ATP6V0A1Q93050 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
ATP6V0A1Q93050 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
ATP6V0A1Q93050 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
ATP6V0A1Q93050 AL358852.1-201ENST00000623174 1268 ntBASIC24.78■■□□□ 1.56
ATP6V0A1Q93050 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
ATP6V0A1Q93050 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
ATP6V0A1Q93050 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC24.77■■□□□ 1.56
ATP6V0A1Q93050 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
ATP6V0A1Q93050 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
ATP6V0A1Q93050 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
ATP6V0A1Q93050 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC24.77■■□□□ 1.56
ATP6V0A1Q93050 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC24.77■■□□□ 1.56
ATP6V0A1Q93050 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
ATP6V0A1Q93050 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
ATP6V0A1Q93050 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
ATP6V0A1Q93050 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
ATP6V0A1Q93050 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC24.77■■□□□ 1.56
ATP6V0A1Q93050 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.77■■□□□ 1.56
ATP6V0A1Q93050 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
ATP6V0A1Q93050 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
ATP6V0A1Q93050 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
ATP6V0A1Q93050 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
ATP6V0A1Q93050 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
ATP6V0A1Q93050 MIR572-201ENST00000384983 95 ntBASIC24.76■■□□□ 1.55
ATP6V0A1Q93050 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
ATP6V0A1Q93050 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC24.76■■□□□ 1.55
ATP6V0A1Q93050 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.76■■□□□ 1.55
ATP6V0A1Q93050 AC010525.1-201ENST00000585559 441 ntBASIC24.76■■□□□ 1.55
ATP6V0A1Q93050 AL031602.1-201ENST00000633169 911 ntBASIC24.76■■□□□ 1.55
ATP6V0A1Q93050 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
ATP6V0A1Q93050 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
ATP6V0A1Q93050 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
ATP6V0A1Q93050 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
ATP6V0A1Q93050 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
ATP6V0A1Q93050 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
ATP6V0A1Q93050 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
ATP6V0A1Q93050 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
ATP6V0A1Q93050 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
ATP6V0A1Q93050 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
ATP6V0A1Q93050 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
ATP6V0A1Q93050 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
ATP6V0A1Q93050 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24.75■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms