Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TM9SF4Q92544 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TM9SF4Q92544 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TM9SF4Q92544 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
TM9SF4Q92544 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TM9SF4Q92544 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.81■□□□□ 0.92
TM9SF4Q92544 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.8■□□□□ 0.92
TM9SF4Q92544 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.8■□□□□ 0.92
TM9SF4Q92544 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TM9SF4Q92544 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TM9SF4Q92544 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TM9SF4Q92544 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.8■□□□□ 0.92
TM9SF4Q92544 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.8■□□□□ 0.92
TM9SF4Q92544 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TM9SF4Q92544 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TM9SF4Q92544 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.8■□□□□ 0.92
TM9SF4Q92544 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TM9SF4Q92544 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.8■□□□□ 0.92
TM9SF4Q92544 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.8■□□□□ 0.92
TM9SF4Q92544 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.8■□□□□ 0.92
TM9SF4Q92544 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.8■□□□□ 0.92
TM9SF4Q92544 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TM9SF4Q92544 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TM9SF4Q92544 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TM9SF4Q92544 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TM9SF4Q92544 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TM9SF4Q92544 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
TM9SF4Q92544 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.8■□□□□ 0.92
TM9SF4Q92544 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TM9SF4Q92544 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.79■□□□□ 0.92
TM9SF4Q92544 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TM9SF4Q92544 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
TM9SF4Q92544 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TM9SF4Q92544 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.79■□□□□ 0.92
TM9SF4Q92544 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.79■□□□□ 0.92
TM9SF4Q92544 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.79■□□□□ 0.92
TM9SF4Q92544 AC006455.2-201ENST00000429931 906 ntBASIC20.79■□□□□ 0.92
TM9SF4Q92544 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TM9SF4Q92544 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.78■□□□□ 0.92
TM9SF4Q92544 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.78■□□□□ 0.92
TM9SF4Q92544 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TM9SF4Q92544 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.78■□□□□ 0.92
TM9SF4Q92544 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TM9SF4Q92544 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.78■□□□□ 0.92
TM9SF4Q92544 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.78■□□□□ 0.92
TM9SF4Q92544 AC087623.3-201ENST00000607047 1098 ntBASIC20.78■□□□□ 0.92
TM9SF4Q92544 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.78■□□□□ 0.92
TM9SF4Q92544 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TM9SF4Q92544 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TM9SF4Q92544 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TM9SF4Q92544 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
TM9SF4Q92544 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TM9SF4Q92544 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
TM9SF4Q92544 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TM9SF4Q92544 AC126544.1-201ENST00000580842 1059 ntBASIC20.77■□□□□ 0.92
TM9SF4Q92544 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
TM9SF4Q92544 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TM9SF4Q92544 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
TM9SF4Q92544 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TM9SF4Q92544 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TM9SF4Q92544 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TM9SF4Q92544 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TM9SF4Q92544 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TM9SF4Q92544 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.76■□□□□ 0.91
TM9SF4Q92544 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.76■□□□□ 0.91
TM9SF4Q92544 AL162430.1-201ENST00000480705 870 ntBASIC20.76■□□□□ 0.91
TM9SF4Q92544 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TM9SF4Q92544 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TM9SF4Q92544 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.76■□□□□ 0.91
TM9SF4Q92544 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TM9SF4Q92544 HLA-L-211ENST00000482052 1765 ntBASIC20.76■□□□□ 0.91
TM9SF4Q92544 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
TM9SF4Q92544 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TM9SF4Q92544 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
TM9SF4Q92544 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TM9SF4Q92544 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TM9SF4Q92544 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TM9SF4Q92544 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TM9SF4Q92544 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
TM9SF4Q92544 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TM9SF4Q92544 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TM9SF4Q92544 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.75■□□□□ 0.91
TM9SF4Q92544 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TM9SF4Q92544 pRNA.6-201ENST00000610482 90 ntBASIC20.75■□□□□ 0.91
TM9SF4Q92544 pRNA.5-201ENST00000612139 90 ntBASIC20.75■□□□□ 0.91
TM9SF4Q92544 pRNA.11-201ENST00000618423 90 ntBASIC20.75■□□□□ 0.91
TM9SF4Q92544 pRNA.13-201ENST00000619112 90 ntBASIC20.75■□□□□ 0.91
TM9SF4Q92544 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.75■□□□□ 0.91
TM9SF4Q92544 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TM9SF4Q92544 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TM9SF4Q92544 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TM9SF4Q92544 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TM9SF4Q92544 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TM9SF4Q92544 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TM9SF4Q92544 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TM9SF4Q92544 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TM9SF4Q92544 ALDH1A3-203ENST00000557963 1670 ntBASIC20.74■□□□□ 0.91
TM9SF4Q92544 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
TM9SF4Q92544 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.74■□□□□ 0.91
TM9SF4Q92544 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms