Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 KRT19P1-201ENST00000405746 1186 ntBASIC20.98■□□□□ 0.95
SNIP1Q8TAD8 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNIP1Q8TAD8 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SNIP1Q8TAD8 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SNIP1Q8TAD8 DUX4L4-201ENST00000566884 1269 ntBASIC20.98■□□□□ 0.95
SNIP1Q8TAD8 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SNIP1Q8TAD8 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SNIP1Q8TAD8 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.98■□□□□ 0.95
SNIP1Q8TAD8 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.97■□□□□ 0.95
SNIP1Q8TAD8 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNIP1Q8TAD8 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNIP1Q8TAD8 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SNIP1Q8TAD8 MIR663A-201ENST00000385250 93 ntBASIC20.97■□□□□ 0.95
SNIP1Q8TAD8 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SNIP1Q8TAD8 KRT18P11-201ENST00000435214 1283 ntBASIC20.97■□□□□ 0.95
SNIP1Q8TAD8 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SNIP1Q8TAD8 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.97■□□□□ 0.95
SNIP1Q8TAD8 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SNIP1Q8TAD8 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.97■□□□□ 0.95
SNIP1Q8TAD8 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SNIP1Q8TAD8 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.96■□□□□ 0.95
SNIP1Q8TAD8 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.96■□□□□ 0.95
SNIP1Q8TAD8 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.96■□□□□ 0.95
SNIP1Q8TAD8 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.96■□□□□ 0.95
SNIP1Q8TAD8 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
SNIP1Q8TAD8 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SNIP1Q8TAD8 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNIP1Q8TAD8 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNIP1Q8TAD8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
SNIP1Q8TAD8 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SNIP1Q8TAD8 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SNIP1Q8TAD8 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
SNIP1Q8TAD8 AC142086.2-201ENST00000569753 217 ntBASIC20.95■□□□□ 0.94
SNIP1Q8TAD8 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.95■□□□□ 0.94
SNIP1Q8TAD8 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNIP1Q8TAD8 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.95■□□□□ 0.94
SNIP1Q8TAD8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.95■□□□□ 0.94
SNIP1Q8TAD8 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNIP1Q8TAD8 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNIP1Q8TAD8 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SNIP1Q8TAD8 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.95■□□□□ 0.94
SNIP1Q8TAD8 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNIP1Q8TAD8 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNIP1Q8TAD8 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SNIP1Q8TAD8 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.94■□□□□ 0.94
SNIP1Q8TAD8 TSPY20P-201ENST00000450910 630 ntBASIC20.94■□□□□ 0.94
SNIP1Q8TAD8 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNIP1Q8TAD8 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.94■□□□□ 0.94
SNIP1Q8TAD8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SNIP1Q8TAD8 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.94■□□□□ 0.94
SNIP1Q8TAD8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SNIP1Q8TAD8 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNIP1Q8TAD8 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SNIP1Q8TAD8 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.93■□□□□ 0.94
SNIP1Q8TAD8 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.93■□□□□ 0.94
SNIP1Q8TAD8 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.93■□□□□ 0.94
SNIP1Q8TAD8 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.93■□□□□ 0.94
SNIP1Q8TAD8 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
SNIP1Q8TAD8 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.93■□□□□ 0.94
SNIP1Q8TAD8 AC011767.1-201ENST00000617410 1153 ntBASIC20.93■□□□□ 0.94
SNIP1Q8TAD8 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.93■□□□□ 0.94
SNIP1Q8TAD8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.93■□□□□ 0.94
SNIP1Q8TAD8 FP325331.1-202ENST00000623531 1380 ntBASIC20.93■□□□□ 0.94
SNIP1Q8TAD8 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SNIP1Q8TAD8 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNIP1Q8TAD8 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNIP1Q8TAD8 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNIP1Q8TAD8 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNIP1Q8TAD8 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SNIP1Q8TAD8 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SNIP1Q8TAD8 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.92■□□□□ 0.94
SNIP1Q8TAD8 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.92■□□□□ 0.94
SNIP1Q8TAD8 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.92■□□□□ 0.94
SNIP1Q8TAD8 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SNIP1Q8TAD8 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.92■□□□□ 0.94
SNIP1Q8TAD8 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNIP1Q8TAD8 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.92■□□□□ 0.94
SNIP1Q8TAD8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SNIP1Q8TAD8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNIP1Q8TAD8 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SNIP1Q8TAD8 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SNIP1Q8TAD8 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNIP1Q8TAD8 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNIP1Q8TAD8 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNIP1Q8TAD8 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SNIP1Q8TAD8 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.91■□□□□ 0.94
SNIP1Q8TAD8 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SNIP1Q8TAD8 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.91■□□□□ 0.94
SNIP1Q8TAD8 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SNIP1Q8TAD8 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.9■□□□□ 0.94
SNIP1Q8TAD8 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.9■□□□□ 0.94
SNIP1Q8TAD8 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNIP1Q8TAD8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
SNIP1Q8TAD8 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.9■□□□□ 0.94
SNIP1Q8TAD8 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNIP1Q8TAD8 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.9■□□□□ 0.94
SNIP1Q8TAD8 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNIP1Q8TAD8 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNIP1Q8TAD8 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNIP1Q8TAD8 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms