Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.66■□□□□ 0.74
CNEP1R1Q8N9A8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CNEP1R1Q8N9A8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CNEP1R1Q8N9A8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.66■□□□□ 0.74
CNEP1R1Q8N9A8 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CNEP1R1Q8N9A8 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNEP1R1Q8N9A8 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
CNEP1R1Q8N9A8 AL353803.4-201ENST00000565882 1934 ntBASIC19.66■□□□□ 0.74
CNEP1R1Q8N9A8 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CNEP1R1Q8N9A8 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNEP1R1Q8N9A8 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNEP1R1Q8N9A8 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CNEP1R1Q8N9A8 OR2I1P-207ENST00000453522 948 ntBASIC19.65■□□□□ 0.74
CNEP1R1Q8N9A8 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.65■□□□□ 0.74
CNEP1R1Q8N9A8 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.65■□□□□ 0.74
CNEP1R1Q8N9A8 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNEP1R1Q8N9A8 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNEP1R1Q8N9A8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNEP1R1Q8N9A8 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNEP1R1Q8N9A8 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.65■□□□□ 0.74
CNEP1R1Q8N9A8 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CNEP1R1Q8N9A8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.64■□□□□ 0.74
CNEP1R1Q8N9A8 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
CNEP1R1Q8N9A8 AC026271.2-201ENST00000428091 497 ntBASIC19.64■□□□□ 0.73
CNEP1R1Q8N9A8 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.64■□□□□ 0.73
CNEP1R1Q8N9A8 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.64■□□□□ 0.73
CNEP1R1Q8N9A8 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CNEP1R1Q8N9A8 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.64■□□□□ 0.73
CNEP1R1Q8N9A8 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.64■□□□□ 0.73
CNEP1R1Q8N9A8 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNEP1R1Q8N9A8 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CNEP1R1Q8N9A8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNEP1R1Q8N9A8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CNEP1R1Q8N9A8 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CNEP1R1Q8N9A8 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNEP1R1Q8N9A8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNEP1R1Q8N9A8 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNEP1R1Q8N9A8 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CNEP1R1Q8N9A8 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNEP1R1Q8N9A8 AC004687.1-201ENST00000579003 1625 ntBASIC19.63■□□□□ 0.73
CNEP1R1Q8N9A8 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CNEP1R1Q8N9A8 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CNEP1R1Q8N9A8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.63■□□□□ 0.73
CNEP1R1Q8N9A8 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CNEP1R1Q8N9A8 IGHV3-19-201ENST00000521488 291 ntBASIC19.63■□□□□ 0.73
CNEP1R1Q8N9A8 MIR5787-201ENST00000611784 55 ntBASIC19.63■□□□□ 0.73
CNEP1R1Q8N9A8 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.63■□□□□ 0.73
CNEP1R1Q8N9A8 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
CNEP1R1Q8N9A8 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CNEP1R1Q8N9A8 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CNEP1R1Q8N9A8 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.62■□□□□ 0.73
CNEP1R1Q8N9A8 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.62■□□□□ 0.73
CNEP1R1Q8N9A8 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.62■□□□□ 0.73
CNEP1R1Q8N9A8 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNEP1R1Q8N9A8 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNEP1R1Q8N9A8 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNEP1R1Q8N9A8 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CNEP1R1Q8N9A8 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNEP1R1Q8N9A8 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.62■□□□□ 0.73
CNEP1R1Q8N9A8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNEP1R1Q8N9A8 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNEP1R1Q8N9A8 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CNEP1R1Q8N9A8 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CNEP1R1Q8N9A8 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CNEP1R1Q8N9A8 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CNEP1R1Q8N9A8 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNEP1R1Q8N9A8 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNEP1R1Q8N9A8 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.61■□□□□ 0.73
CNEP1R1Q8N9A8 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.61■□□□□ 0.73
CNEP1R1Q8N9A8 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNEP1R1Q8N9A8 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.61■□□□□ 0.73
CNEP1R1Q8N9A8 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNEP1R1Q8N9A8 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNEP1R1Q8N9A8 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.6■□□□□ 0.73
CNEP1R1Q8N9A8 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
CNEP1R1Q8N9A8 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNEP1R1Q8N9A8 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.6■□□□□ 0.73
CNEP1R1Q8N9A8 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNEP1R1Q8N9A8 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CNEP1R1Q8N9A8 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CNEP1R1Q8N9A8 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CNEP1R1Q8N9A8 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNEP1R1Q8N9A8 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CNEP1R1Q8N9A8 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CNEP1R1Q8N9A8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNEP1R1Q8N9A8 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNEP1R1Q8N9A8 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNEP1R1Q8N9A8 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CNEP1R1Q8N9A8 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNEP1R1Q8N9A8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.59■□□□□ 0.73
CNEP1R1Q8N9A8 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.59■□□□□ 0.73
CNEP1R1Q8N9A8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.59■□□□□ 0.73
CNEP1R1Q8N9A8 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNEP1R1Q8N9A8 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CNEP1R1Q8N9A8 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.59■□□□□ 0.73
CNEP1R1Q8N9A8 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CNEP1R1Q8N9A8 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CNEP1R1Q8N9A8 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CNEP1R1Q8N9A8 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNEP1R1Q8N9A8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms