Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.28■■□□□ 1
TRIML2Q8N7C3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIML2Q8N7C3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIML2Q8N7C3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRIML2Q8N7C3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIML2Q8N7C3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIML2Q8N7C3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIML2Q8N7C3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
TRIML2Q8N7C3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIML2Q8N7C3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.27■■□□□ 1
TRIML2Q8N7C3 MIR4508-201ENST00000584178 70 ntBASIC21.27■■□□□ 1
TRIML2Q8N7C3 AC012354.3-201ENST00000623734 483 ntBASIC21.27■■□□□ 1
TRIML2Q8N7C3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
TRIML2Q8N7C3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIML2Q8N7C3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIML2Q8N7C3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIML2Q8N7C3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.26■□□□□ 0.99
TRIML2Q8N7C3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.26■□□□□ 0.99
TRIML2Q8N7C3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIML2Q8N7C3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIML2Q8N7C3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIML2Q8N7C3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.26■□□□□ 0.99
TRIML2Q8N7C3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIML2Q8N7C3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIML2Q8N7C3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.25■□□□□ 0.99
TRIML2Q8N7C3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
TRIML2Q8N7C3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.25■□□□□ 0.99
TRIML2Q8N7C3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.25■□□□□ 0.99
TRIML2Q8N7C3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.25■□□□□ 0.99
TRIML2Q8N7C3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIML2Q8N7C3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
TRIML2Q8N7C3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIML2Q8N7C3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIML2Q8N7C3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRIML2Q8N7C3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.24■□□□□ 0.99
TRIML2Q8N7C3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.24■□□□□ 0.99
TRIML2Q8N7C3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRIML2Q8N7C3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIML2Q8N7C3 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRIML2Q8N7C3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIML2Q8N7C3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIML2Q8N7C3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRIML2Q8N7C3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIML2Q8N7C3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TRIML2Q8N7C3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.23■□□□□ 0.99
TRIML2Q8N7C3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIML2Q8N7C3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIML2Q8N7C3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
TRIML2Q8N7C3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.23■□□□□ 0.99
TRIML2Q8N7C3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRIML2Q8N7C3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIML2Q8N7C3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIML2Q8N7C3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIML2Q8N7C3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.23■□□□□ 0.99
TRIML2Q8N7C3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRIML2Q8N7C3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
TRIML2Q8N7C3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIML2Q8N7C3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIML2Q8N7C3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.22■□□□□ 0.99
TRIML2Q8N7C3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIML2Q8N7C3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
TRIML2Q8N7C3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIML2Q8N7C3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIML2Q8N7C3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIML2Q8N7C3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIML2Q8N7C3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TRIML2Q8N7C3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
TRIML2Q8N7C3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRIML2Q8N7C3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIML2Q8N7C3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIML2Q8N7C3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIML2Q8N7C3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.21■□□□□ 0.99
TRIML2Q8N7C3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIML2Q8N7C3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.21■□□□□ 0.99
TRIML2Q8N7C3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
TRIML2Q8N7C3 YBX1P4-201ENST00000392794 808 ntBASIC21.21■□□□□ 0.99
TRIML2Q8N7C3 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.21■□□□□ 0.99
TRIML2Q8N7C3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.21■□□□□ 0.99
TRIML2Q8N7C3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIML2Q8N7C3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIML2Q8N7C3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
TRIML2Q8N7C3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.2■□□□□ 0.98
TRIML2Q8N7C3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
TRIML2Q8N7C3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIML2Q8N7C3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.2■□□□□ 0.98
TRIML2Q8N7C3 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.2■□□□□ 0.98
TRIML2Q8N7C3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIML2Q8N7C3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
TRIML2Q8N7C3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.2■□□□□ 0.98
TRIML2Q8N7C3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIML2Q8N7C3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
TRIML2Q8N7C3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.19■□□□□ 0.98
TRIML2Q8N7C3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIML2Q8N7C3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
TRIML2Q8N7C3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TRIML2Q8N7C3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TRIML2Q8N7C3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIML2Q8N7C3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIML2Q8N7C3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIML2Q8N7C3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms