Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.59■■□□□ 1.37
TTC39CQ8N584 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
TTC39CQ8N584 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TTC39CQ8N584 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
TTC39CQ8N584 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TTC39CQ8N584 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.58■■□□□ 1.37
TTC39CQ8N584 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TTC39CQ8N584 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.58■■□□□ 1.37
TTC39CQ8N584 OR2I1P-207ENST00000453522 948 ntBASIC23.58■■□□□ 1.37
TTC39CQ8N584 AC106739.1-201ENST00000617035 715 ntBASIC23.58■■□□□ 1.37
TTC39CQ8N584 AC004687.1-201ENST00000579003 1625 ntBASIC23.58■■□□□ 1.36
TTC39CQ8N584 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.36
TTC39CQ8N584 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
TTC39CQ8N584 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.57■■□□□ 1.36
TTC39CQ8N584 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
TTC39CQ8N584 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.57■■□□□ 1.36
TTC39CQ8N584 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
TTC39CQ8N584 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.57■■□□□ 1.36
TTC39CQ8N584 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.57■■□□□ 1.36
TTC39CQ8N584 AC024257.2-201ENST00000549699 147 ntBASIC23.57■■□□□ 1.36
TTC39CQ8N584 AL139246.5-201ENST00000606645 996 ntBASIC23.57■■□□□ 1.36
TTC39CQ8N584 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.57■■□□□ 1.36
TTC39CQ8N584 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.57■■□□□ 1.36
TTC39CQ8N584 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.57■■□□□ 1.36
TTC39CQ8N584 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
TTC39CQ8N584 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TTC39CQ8N584 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TTC39CQ8N584 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TTC39CQ8N584 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
TTC39CQ8N584 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.56■■□□□ 1.36
TTC39CQ8N584 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TTC39CQ8N584 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
TTC39CQ8N584 AC133561.4-201ENST00000566112 224 ntBASIC23.56■■□□□ 1.36
TTC39CQ8N584 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
TTC39CQ8N584 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.56■■□□□ 1.36
TTC39CQ8N584 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TTC39CQ8N584 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TTC39CQ8N584 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
TTC39CQ8N584 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TTC39CQ8N584 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
TTC39CQ8N584 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TTC39CQ8N584 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TTC39CQ8N584 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TTC39CQ8N584 PBX2P1-201ENST00000493219 1291 ntBASIC23.55■■□□□ 1.36
TTC39CQ8N584 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.55■■□□□ 1.36
TTC39CQ8N584 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.55■■□□□ 1.36
TTC39CQ8N584 AC110285.6-201ENST00000617652 491 ntBASIC23.55■■□□□ 1.36
TTC39CQ8N584 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TTC39CQ8N584 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TTC39CQ8N584 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.55■■□□□ 1.36
TTC39CQ8N584 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TTC39CQ8N584 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
TTC39CQ8N584 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.54■■□□□ 1.36
TTC39CQ8N584 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
TTC39CQ8N584 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TTC39CQ8N584 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
TTC39CQ8N584 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TTC39CQ8N584 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.54■■□□□ 1.36
TTC39CQ8N584 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
TTC39CQ8N584 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.54■■□□□ 1.36
TTC39CQ8N584 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TTC39CQ8N584 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TTC39CQ8N584 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.54■■□□□ 1.36
TTC39CQ8N584 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
TTC39CQ8N584 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
TTC39CQ8N584 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.53■■□□□ 1.36
TTC39CQ8N584 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
TTC39CQ8N584 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.53■■□□□ 1.36
TTC39CQ8N584 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.53■■□□□ 1.36
TTC39CQ8N584 EDA-201ENST00000338901 1233 ntBASIC23.53■■□□□ 1.36
TTC39CQ8N584 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TTC39CQ8N584 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TTC39CQ8N584 MIR4767-201ENST00000582827 78 ntBASIC23.53■■□□□ 1.36
TTC39CQ8N584 AC068587.7-201ENST00000641602 218 ntBASIC23.53■■□□□ 1.36
TTC39CQ8N584 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TTC39CQ8N584 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.52■■□□□ 1.36
TTC39CQ8N584 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.52■■□□□ 1.36
TTC39CQ8N584 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TTC39CQ8N584 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.52■■□□□ 1.36
TTC39CQ8N584 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.52■■□□□ 1.36
TTC39CQ8N584 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.52■■□□□ 1.36
TTC39CQ8N584 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.52■■□□□ 1.36
TTC39CQ8N584 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.52■■□□□ 1.36
TTC39CQ8N584 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.52■■□□□ 1.36
TTC39CQ8N584 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.52■■□□□ 1.36
TTC39CQ8N584 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TTC39CQ8N584 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.52■■□□□ 1.36
TTC39CQ8N584 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.52■■□□□ 1.36
TTC39CQ8N584 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.51■■□□□ 1.35
TTC39CQ8N584 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
TTC39CQ8N584 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.51■■□□□ 1.35
TTC39CQ8N584 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.51■■□□□ 1.35
TTC39CQ8N584 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.51■■□□□ 1.35
TTC39CQ8N584 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TTC39CQ8N584 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TTC39CQ8N584 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
TTC39CQ8N584 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TTC39CQ8N584 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
TTC39CQ8N584 BX842568.3-201ENST00000418104 571 ntBASIC23.5■■□□□ 1.35
TTC39CQ8N584 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms