Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 AC027682.1-201ENST00000562846 899 ntBASIC21.01■□□□□ 0.95
ARHGEF39Q8N4T4 AC010525.1-201ENST00000585559 441 ntBASIC21.01■□□□□ 0.95
ARHGEF39Q8N4T4 AC233992.3-201ENST00000607491 485 ntBASIC21.01■□□□□ 0.95
ARHGEF39Q8N4T4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARHGEF39Q8N4T4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARHGEF39Q8N4T4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
ARHGEF39Q8N4T4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.01■□□□□ 0.95
ARHGEF39Q8N4T4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
ARHGEF39Q8N4T4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21■□□□□ 0.95
ARHGEF39Q8N4T4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ARHGEF39Q8N4T4 RASA4CP-201ENST00000424092 1398 ntBASIC21■□□□□ 0.95
ARHGEF39Q8N4T4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
ARHGEF39Q8N4T4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ARHGEF39Q8N4T4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21■□□□□ 0.95
ARHGEF39Q8N4T4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21■□□□□ 0.95
ARHGEF39Q8N4T4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
ARHGEF39Q8N4T4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
ARHGEF39Q8N4T4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.99■□□□□ 0.95
ARHGEF39Q8N4T4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ARHGEF39Q8N4T4 AC099791.1-201ENST00000416440 715 ntBASIC20.99■□□□□ 0.95
ARHGEF39Q8N4T4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ARHGEF39Q8N4T4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.99■□□□□ 0.95
ARHGEF39Q8N4T4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ARHGEF39Q8N4T4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.99■□□□□ 0.95
ARHGEF39Q8N4T4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.99■□□□□ 0.95
ARHGEF39Q8N4T4 CA15P2-201ENST00000611168 834 ntBASIC20.99■□□□□ 0.95
ARHGEF39Q8N4T4 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ARHGEF39Q8N4T4 AC004687.1-201ENST00000579003 1625 ntBASIC20.99■□□□□ 0.95
ARHGEF39Q8N4T4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ARHGEF39Q8N4T4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
ARHGEF39Q8N4T4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARHGEF39Q8N4T4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARHGEF39Q8N4T4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARHGEF39Q8N4T4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ARHGEF39Q8N4T4 AC008764.7-201ENST00000593779 1081 ntBASIC20.98■□□□□ 0.95
ARHGEF39Q8N4T4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ARHGEF39Q8N4T4 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.98■□□□□ 0.95
ARHGEF39Q8N4T4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARHGEF39Q8N4T4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARHGEF39Q8N4T4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ARHGEF39Q8N4T4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
ARHGEF39Q8N4T4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ARHGEF39Q8N4T4 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.97■□□□□ 0.95
ARHGEF39Q8N4T4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ARHGEF39Q8N4T4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ARHGEF39Q8N4T4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
ARHGEF39Q8N4T4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ARHGEF39Q8N4T4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ARHGEF39Q8N4T4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
ARHGEF39Q8N4T4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.97■□□□□ 0.95
ARHGEF39Q8N4T4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
ARHGEF39Q8N4T4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ARHGEF39Q8N4T4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ARHGEF39Q8N4T4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ARHGEF39Q8N4T4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ARHGEF39Q8N4T4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
ARHGEF39Q8N4T4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
ARHGEF39Q8N4T4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ARHGEF39Q8N4T4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.96■□□□□ 0.95
ARHGEF39Q8N4T4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ARHGEF39Q8N4T4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.96■□□□□ 0.95
ARHGEF39Q8N4T4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ARHGEF39Q8N4T4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ARHGEF39Q8N4T4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
ARHGEF39Q8N4T4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ARHGEF39Q8N4T4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ARHGEF39Q8N4T4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ARHGEF39Q8N4T4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ARHGEF39Q8N4T4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.95■□□□□ 0.94
ARHGEF39Q8N4T4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
ARHGEF39Q8N4T4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.95■□□□□ 0.94
ARHGEF39Q8N4T4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ARHGEF39Q8N4T4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ARHGEF39Q8N4T4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ARHGEF39Q8N4T4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.95■□□□□ 0.94
ARHGEF39Q8N4T4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.94■□□□□ 0.94
ARHGEF39Q8N4T4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
ARHGEF39Q8N4T4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
ARHGEF39Q8N4T4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ARHGEF39Q8N4T4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ARHGEF39Q8N4T4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ARHGEF39Q8N4T4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ARHGEF39Q8N4T4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.94■□□□□ 0.94
ARHGEF39Q8N4T4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.94■□□□□ 0.94
ARHGEF39Q8N4T4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
ARHGEF39Q8N4T4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.94■□□□□ 0.94
ARHGEF39Q8N4T4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
ARHGEF39Q8N4T4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.94■□□□□ 0.94
ARHGEF39Q8N4T4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ARHGEF39Q8N4T4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
ARHGEF39Q8N4T4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ARHGEF39Q8N4T4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.93■□□□□ 0.94
ARHGEF39Q8N4T4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.93■□□□□ 0.94
ARHGEF39Q8N4T4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.93■□□□□ 0.94
ARHGEF39Q8N4T4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.93■□□□□ 0.94
ARHGEF39Q8N4T4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ARHGEF39Q8N4T4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.93■□□□□ 0.94
ARHGEF39Q8N4T4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
ARHGEF39Q8N4T4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
ARHGEF39Q8N4T4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 710 ms