Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC24.75■■□□□ 1.55
CCDC60Q8IWA6 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.74■■□□□ 1.55
CCDC60Q8IWA6 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CCDC60Q8IWA6 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
CCDC60Q8IWA6 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CCDC60Q8IWA6 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC24.74■■□□□ 1.55
CCDC60Q8IWA6 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CCDC60Q8IWA6 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC24.74■■□□□ 1.55
CCDC60Q8IWA6 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC24.74■■□□□ 1.55
CCDC60Q8IWA6 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CCDC60Q8IWA6 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CCDC60Q8IWA6 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC24.73■■□□□ 1.55
CCDC60Q8IWA6 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CCDC60Q8IWA6 AC092068.2-201ENST00000590491 1708 ntBASIC24.73■■□□□ 1.55
CCDC60Q8IWA6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC24.73■■□□□ 1.55
CCDC60Q8IWA6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
CCDC60Q8IWA6 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC24.73■■□□□ 1.55
CCDC60Q8IWA6 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
CCDC60Q8IWA6 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
CCDC60Q8IWA6 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
CCDC60Q8IWA6 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
CCDC60Q8IWA6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CCDC60Q8IWA6 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC24.72■■□□□ 1.55
CCDC60Q8IWA6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
CCDC60Q8IWA6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
CCDC60Q8IWA6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC24.72■■□□□ 1.55
CCDC60Q8IWA6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CCDC60Q8IWA6 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
CCDC60Q8IWA6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CCDC60Q8IWA6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.72■■□□□ 1.55
CCDC60Q8IWA6 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CCDC60Q8IWA6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
CCDC60Q8IWA6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
CCDC60Q8IWA6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CCDC60Q8IWA6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC24.71■■□□□ 1.55
CCDC60Q8IWA6 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC24.71■■□□□ 1.55
CCDC60Q8IWA6 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CCDC60Q8IWA6 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
CCDC60Q8IWA6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC24.71■■□□□ 1.55
CCDC60Q8IWA6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC24.71■■□□□ 1.55
CCDC60Q8IWA6 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
CCDC60Q8IWA6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
CCDC60Q8IWA6 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.55
CCDC60Q8IWA6 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC24.7■■□□□ 1.55
CCDC60Q8IWA6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC24.7■■□□□ 1.54
CCDC60Q8IWA6 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
CCDC60Q8IWA6 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC24.7■■□□□ 1.54
CCDC60Q8IWA6 MIR6821-201ENST00000617625 74 ntBASIC24.7■■□□□ 1.54
CCDC60Q8IWA6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC24.7■■□□□ 1.54
CCDC60Q8IWA6 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CCDC60Q8IWA6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC24.69■■□□□ 1.54
CCDC60Q8IWA6 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CCDC60Q8IWA6 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CCDC60Q8IWA6 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC24.69■■□□□ 1.54
CCDC60Q8IWA6 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
CCDC60Q8IWA6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC24.69■■□□□ 1.54
CCDC60Q8IWA6 AC097381.1-201ENST00000429019 1296 ntBASIC24.69■■□□□ 1.54
CCDC60Q8IWA6 AP005435.1-201ENST00000529293 1178 ntBASIC24.69■■□□□ 1.54
CCDC60Q8IWA6 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CCDC60Q8IWA6 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
CCDC60Q8IWA6 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CCDC60Q8IWA6 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CCDC60Q8IWA6 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CCDC60Q8IWA6 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC24.68■■□□□ 1.54
CCDC60Q8IWA6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC24.68■■□□□ 1.54
CCDC60Q8IWA6 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
CCDC60Q8IWA6 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
CCDC60Q8IWA6 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CCDC60Q8IWA6 MIR572-201ENST00000384983 95 ntBASIC24.68■■□□□ 1.54
CCDC60Q8IWA6 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CCDC60Q8IWA6 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC24.68■■□□□ 1.54
CCDC60Q8IWA6 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
CCDC60Q8IWA6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CCDC60Q8IWA6 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.67■■□□□ 1.54
CCDC60Q8IWA6 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC24.67■■□□□ 1.54
CCDC60Q8IWA6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CCDC60Q8IWA6 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CCDC60Q8IWA6 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CCDC60Q8IWA6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CCDC60Q8IWA6 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC24.67■■□□□ 1.54
CCDC60Q8IWA6 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC24.67■■□□□ 1.54
CCDC60Q8IWA6 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CCDC60Q8IWA6 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC24.67■■□□□ 1.54
CCDC60Q8IWA6 AC087623.3-201ENST00000607047 1098 ntBASIC24.67■■□□□ 1.54
CCDC60Q8IWA6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC24.67■■□□□ 1.54
CCDC60Q8IWA6 SP2-202ENST00000613139 908 ntTSL 5 BASIC24.67■■□□□ 1.54
CCDC60Q8IWA6 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
CCDC60Q8IWA6 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CCDC60Q8IWA6 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
CCDC60Q8IWA6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CCDC60Q8IWA6 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC24.66■■□□□ 1.54
CCDC60Q8IWA6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CCDC60Q8IWA6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC24.66■■□□□ 1.54
CCDC60Q8IWA6 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CCDC60Q8IWA6 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
CCDC60Q8IWA6 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CCDC60Q8IWA6 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CCDC60Q8IWA6 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC24.66■■□□□ 1.54
CCDC60Q8IWA6 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC24.66■■□□□ 1.54
CCDC60Q8IWA6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC24.66■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms