Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CHD1LQ86WJ1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC27.43■■□□□ 1.98
CHD1LQ86WJ1 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
CHD1LQ86WJ1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CHD1LQ86WJ1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC27.42■■□□□ 1.98
CHD1LQ86WJ1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC27.42■■□□□ 1.98
CHD1LQ86WJ1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC27.42■■□□□ 1.98
CHD1LQ86WJ1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CHD1LQ86WJ1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC27.42■■□□□ 1.98
CHD1LQ86WJ1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC27.42■■□□□ 1.98
CHD1LQ86WJ1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC27.42■■□□□ 1.98
CHD1LQ86WJ1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
CHD1LQ86WJ1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CHD1LQ86WJ1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC27.42■■□□□ 1.98
CHD1LQ86WJ1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CHD1LQ86WJ1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
CHD1LQ86WJ1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CHD1LQ86WJ1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC27.41■■□□□ 1.98
CHD1LQ86WJ1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CHD1LQ86WJ1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CHD1LQ86WJ1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CHD1LQ86WJ1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC27.41■■□□□ 1.98
CHD1LQ86WJ1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CHD1LQ86WJ1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CHD1LQ86WJ1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC27.41■■□□□ 1.98
CHD1LQ86WJ1 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
CHD1LQ86WJ1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CHD1LQ86WJ1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC27.4■■□□□ 1.98
CHD1LQ86WJ1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC27.4■■□□□ 1.98
CHD1LQ86WJ1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC27.4■■□□□ 1.98
CHD1LQ86WJ1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CHD1LQ86WJ1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
CHD1LQ86WJ1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC27.39■■□□□ 1.98
CHD1LQ86WJ1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC27.39■■□□□ 1.98
CHD1LQ86WJ1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CHD1LQ86WJ1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC27.39■■□□□ 1.98
CHD1LQ86WJ1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CHD1LQ86WJ1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CHD1LQ86WJ1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
CHD1LQ86WJ1 AC009086.3-201ENST00000623486 1008 ntBASIC27.39■■□□□ 1.98
CHD1LQ86WJ1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
CHD1LQ86WJ1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC27.39■■□□□ 1.97
CHD1LQ86WJ1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
CHD1LQ86WJ1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CHD1LQ86WJ1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC27.38■■□□□ 1.97
CHD1LQ86WJ1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC27.38■■□□□ 1.97
CHD1LQ86WJ1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CHD1LQ86WJ1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC27.38■■□□□ 1.97
CHD1LQ86WJ1 AC080038.3-201ENST00000623346 1952 ntBASIC27.38■■□□□ 1.97
CHD1LQ86WJ1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
CHD1LQ86WJ1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CHD1LQ86WJ1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CHD1LQ86WJ1 LINC00565-201ENST00000562710 2331 ntBASIC27.38■■□□□ 1.97
CHD1LQ86WJ1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC27.38■■□□□ 1.97
CHD1LQ86WJ1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CHD1LQ86WJ1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC27.37■■□□□ 1.97
CHD1LQ86WJ1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC27.37■■□□□ 1.97
CHD1LQ86WJ1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CHD1LQ86WJ1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC27.37■■□□□ 1.97
CHD1LQ86WJ1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CHD1LQ86WJ1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
CHD1LQ86WJ1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CHD1LQ86WJ1 AC139530.1-201ENST00000575312 1977 ntBASIC27.37■■□□□ 1.97
CHD1LQ86WJ1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
CHD1LQ86WJ1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
CHD1LQ86WJ1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
CHD1LQ86WJ1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC27.36■■□□□ 1.97
CHD1LQ86WJ1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
CHD1LQ86WJ1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
CHD1LQ86WJ1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CHD1LQ86WJ1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CHD1LQ86WJ1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC27.35■■□□□ 1.97
CHD1LQ86WJ1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
CHD1LQ86WJ1 GUSBP5-201ENST00000418136 578 ntBASIC27.35■■□□□ 1.97
CHD1LQ86WJ1 KRT16P3-201ENST00000439127 1283 ntBASIC27.35■■□□□ 1.97
CHD1LQ86WJ1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CHD1LQ86WJ1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
CHD1LQ86WJ1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC27.35■■□□□ 1.97
CHD1LQ86WJ1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC27.35■■□□□ 1.97
CHD1LQ86WJ1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CHD1LQ86WJ1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CHD1LQ86WJ1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CHD1LQ86WJ1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CHD1LQ86WJ1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CHD1LQ86WJ1 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CHD1LQ86WJ1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC27.34■■□□□ 1.97
CHD1LQ86WJ1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC27.34■■□□□ 1.97
CHD1LQ86WJ1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
CHD1LQ86WJ1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
CHD1LQ86WJ1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CHD1LQ86WJ1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC27.34■■□□□ 1.97
CHD1LQ86WJ1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CHD1LQ86WJ1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
CHD1LQ86WJ1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CHD1LQ86WJ1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC27.33■■□□□ 1.97
CHD1LQ86WJ1 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CHD1LQ86WJ1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CHD1LQ86WJ1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CHD1LQ86WJ1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CHD1LQ86WJ1 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms