Protein–RNA interactions for Protein: Q7RTT4

SSX8, Protein SSX8, humanhuman

Predictions only

Length 187 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX8Q7RTT4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SSX8Q7RTT4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SSX8Q7RTT4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSX8Q7RTT4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSX8Q7RTT4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSX8Q7RTT4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.19■□□□□ 0.66
SSX8Q7RTT4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSX8Q7RTT4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.19■□□□□ 0.66
SSX8Q7RTT4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.19■□□□□ 0.66
SSX8Q7RTT4 AC026271.2-201ENST00000428091 497 ntBASIC19.19■□□□□ 0.66
SSX8Q7RTT4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SSX8Q7RTT4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.19■□□□□ 0.66
SSX8Q7RTT4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.19■□□□□ 0.66
SSX8Q7RTT4 AL353803.4-201ENST00000565882 1934 ntBASIC19.19■□□□□ 0.66
SSX8Q7RTT4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSX8Q7RTT4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.19■□□□□ 0.66
SSX8Q7RTT4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SSX8Q7RTT4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSX8Q7RTT4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.18■□□□□ 0.66
SSX8Q7RTT4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.18■□□□□ 0.66
SSX8Q7RTT4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SSX8Q7RTT4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SSX8Q7RTT4 AC027612.3-201ENST00000413684 1047 ntBASIC19.18■□□□□ 0.66
SSX8Q7RTT4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.18■□□□□ 0.66
SSX8Q7RTT4 AC123595.1-201ENST00000440769 1046 ntBASIC19.18■□□□□ 0.66
SSX8Q7RTT4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.18■□□□□ 0.66
SSX8Q7RTT4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSX8Q7RTT4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSX8Q7RTT4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
SSX8Q7RTT4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSX8Q7RTT4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.18■□□□□ 0.66
SSX8Q7RTT4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SSX8Q7RTT4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSX8Q7RTT4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.18■□□□□ 0.66
SSX8Q7RTT4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSX8Q7RTT4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
SSX8Q7RTT4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.17■□□□□ 0.66
SSX8Q7RTT4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSX8Q7RTT4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSX8Q7RTT4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.17■□□□□ 0.66
SSX8Q7RTT4 YBX1P1-201ENST00000445822 960 ntBASIC19.17■□□□□ 0.66
SSX8Q7RTT4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.17■□□□□ 0.66
SSX8Q7RTT4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSX8Q7RTT4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSX8Q7RTT4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSX8Q7RTT4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SSX8Q7RTT4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.16■□□□□ 0.66
SSX8Q7RTT4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSX8Q7RTT4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSX8Q7RTT4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SSX8Q7RTT4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSX8Q7RTT4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.16■□□□□ 0.66
SSX8Q7RTT4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.16■□□□□ 0.66
SSX8Q7RTT4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSX8Q7RTT4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SSX8Q7RTT4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.16■□□□□ 0.66
SSX8Q7RTT4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SSX8Q7RTT4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSX8Q7RTT4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSX8Q7RTT4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
SSX8Q7RTT4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SSX8Q7RTT4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSX8Q7RTT4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSX8Q7RTT4 AC092068.2-201ENST00000590491 1708 ntBASIC19.15■□□□□ 0.66
SSX8Q7RTT4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSX8Q7RTT4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSX8Q7RTT4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.15■□□□□ 0.66
SSX8Q7RTT4 AC012414.1-201ENST00000556676 535 ntBASIC19.15■□□□□ 0.66
SSX8Q7RTT4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.15■□□□□ 0.66
SSX8Q7RTT4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSX8Q7RTT4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.15■□□□□ 0.66
SSX8Q7RTT4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSX8Q7RTT4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SSX8Q7RTT4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSX8Q7RTT4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSX8Q7RTT4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SSX8Q7RTT4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.14■□□□□ 0.65
SSX8Q7RTT4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.14■□□□□ 0.65
SSX8Q7RTT4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.14■□□□□ 0.65
SSX8Q7RTT4 AC010525.1-201ENST00000585559 441 ntBASIC19.14■□□□□ 0.65
SSX8Q7RTT4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SSX8Q7RTT4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
SSX8Q7RTT4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SSX8Q7RTT4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.14■□□□□ 0.65
SSX8Q7RTT4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SSX8Q7RTT4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SSX8Q7RTT4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSX8Q7RTT4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.13■□□□□ 0.65
SSX8Q7RTT4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSX8Q7RTT4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SSX8Q7RTT4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.13■□□□□ 0.65
SSX8Q7RTT4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSX8Q7RTT4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.13■□□□□ 0.65
SSX8Q7RTT4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.13■□□□□ 0.65
SSX8Q7RTT4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.13■□□□□ 0.65
SSX8Q7RTT4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.13■□□□□ 0.65
SSX8Q7RTT4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.13■□□□□ 0.65
SSX8Q7RTT4 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.13■□□□□ 0.65
SSX8Q7RTT4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSX8Q7RTT4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms