Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP1BQ7LBR1 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CHMP1BQ7LBR1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP1BQ7LBR1 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP1BQ7LBR1 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.24■□□□□ 0.83
CHMP1BQ7LBR1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP1BQ7LBR1 AC099791.2-201ENST00000605725 427 ntBASIC20.24■□□□□ 0.83
CHMP1BQ7LBR1 AL136162.1-201ENST00000607711 1078 ntBASIC20.24■□□□□ 0.83
CHMP1BQ7LBR1 AC110285.6-201ENST00000617652 491 ntBASIC20.24■□□□□ 0.83
CHMP1BQ7LBR1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.24■□□□□ 0.83
CHMP1BQ7LBR1 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.24■□□□□ 0.83
CHMP1BQ7LBR1 AC019069.1-201ENST00000610008 1333 ntBASIC20.24■□□□□ 0.83
CHMP1BQ7LBR1 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP1BQ7LBR1 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHMP1BQ7LBR1 C17orf82-201ENST00000623772 1530 ntBASIC20.23■□□□□ 0.83
CHMP1BQ7LBR1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHMP1BQ7LBR1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
CHMP1BQ7LBR1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CHMP1BQ7LBR1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CHMP1BQ7LBR1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHMP1BQ7LBR1 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.23■□□□□ 0.83
CHMP1BQ7LBR1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.23■□□□□ 0.83
CHMP1BQ7LBR1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CHMP1BQ7LBR1 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CHMP1BQ7LBR1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHMP1BQ7LBR1 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHMP1BQ7LBR1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CHMP1BQ7LBR1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.22■□□□□ 0.83
CHMP1BQ7LBR1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CHMP1BQ7LBR1 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.22■□□□□ 0.83
CHMP1BQ7LBR1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.22■□□□□ 0.83
CHMP1BQ7LBR1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP1BQ7LBR1 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CHMP1BQ7LBR1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.22■□□□□ 0.83
CHMP1BQ7LBR1 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.22■□□□□ 0.83
CHMP1BQ7LBR1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP1BQ7LBR1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CHMP1BQ7LBR1 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP1BQ7LBR1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP1BQ7LBR1 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CHMP1BQ7LBR1 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP1BQ7LBR1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.21■□□□□ 0.83
CHMP1BQ7LBR1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP1BQ7LBR1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP1BQ7LBR1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.21■□□□□ 0.83
CHMP1BQ7LBR1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.21■□□□□ 0.83
CHMP1BQ7LBR1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.21■□□□□ 0.83
CHMP1BQ7LBR1 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.21■□□□□ 0.83
CHMP1BQ7LBR1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CHMP1BQ7LBR1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP1BQ7LBR1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP1BQ7LBR1 AC135279.3-201ENST00000610945 1311 ntBASIC20.21■□□□□ 0.83
CHMP1BQ7LBR1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP1BQ7LBR1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP1BQ7LBR1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP1BQ7LBR1 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP1BQ7LBR1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP1BQ7LBR1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.2■□□□□ 0.82
CHMP1BQ7LBR1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP1BQ7LBR1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP1BQ7LBR1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.2■□□□□ 0.82
CHMP1BQ7LBR1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.2■□□□□ 0.82
CHMP1BQ7LBR1 AC009086.3-201ENST00000623486 1008 ntBASIC20.2■□□□□ 0.82
CHMP1BQ7LBR1 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP1BQ7LBR1 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP1BQ7LBR1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.19■□□□□ 0.82
CHMP1BQ7LBR1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP1BQ7LBR1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP1BQ7LBR1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CHMP1BQ7LBR1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP1BQ7LBR1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CHMP1BQ7LBR1 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CHMP1BQ7LBR1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP1BQ7LBR1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP1BQ7LBR1 MIR638-201ENST00000385237 100 ntBASIC20.19■□□□□ 0.82
CHMP1BQ7LBR1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CHMP1BQ7LBR1 AC133561.4-201ENST00000566112 224 ntBASIC20.19■□□□□ 0.82
CHMP1BQ7LBR1 AC106739.1-201ENST00000617035 715 ntBASIC20.19■□□□□ 0.82
CHMP1BQ7LBR1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP1BQ7LBR1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP1BQ7LBR1 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP1BQ7LBR1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP1BQ7LBR1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.19■□□□□ 0.82
CHMP1BQ7LBR1 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CHMP1BQ7LBR1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP1BQ7LBR1 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP1BQ7LBR1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CHMP1BQ7LBR1 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP1BQ7LBR1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP1BQ7LBR1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP1BQ7LBR1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP1BQ7LBR1 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.18■□□□□ 0.82
CHMP1BQ7LBR1 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.18■□□□□ 0.82
CHMP1BQ7LBR1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.18■□□□□ 0.82
CHMP1BQ7LBR1 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP1BQ7LBR1 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.18■□□□□ 0.82
CHMP1BQ7LBR1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP1BQ7LBR1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.18■□□□□ 0.82
CHMP1BQ7LBR1 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.18■□□□□ 0.82
CHMP1BQ7LBR1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms