Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF44Q7L0R7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF44Q7L0R7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF44Q7L0R7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.21■□□□□ 0.99
RNF44Q7L0R7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.21■□□□□ 0.99
RNF44Q7L0R7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF44Q7L0R7 SUDS3P1-201ENST00000505831 966 ntBASIC21.21■□□□□ 0.99
RNF44Q7L0R7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
RNF44Q7L0R7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
RNF44Q7L0R7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF44Q7L0R7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.2■□□□□ 0.99
RNF44Q7L0R7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF44Q7L0R7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
RNF44Q7L0R7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.2■□□□□ 0.98
RNF44Q7L0R7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF44Q7L0R7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
RNF44Q7L0R7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF44Q7L0R7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF44Q7L0R7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RNF44Q7L0R7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.2■□□□□ 0.98
RNF44Q7L0R7 MIR939-201ENST00000401314 82 ntBASIC21.2■□□□□ 0.98
RNF44Q7L0R7 OR2I1P-207ENST00000453522 948 ntBASIC21.2■□□□□ 0.98
RNF44Q7L0R7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.2■□□□□ 0.98
RNF44Q7L0R7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RNF44Q7L0R7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.2■□□□□ 0.98
RNF44Q7L0R7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
RNF44Q7L0R7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.2■□□□□ 0.98
RNF44Q7L0R7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.2■□□□□ 0.98
RNF44Q7L0R7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF44Q7L0R7 DUSP8P3-201ENST00000399571 1760 ntBASIC21.2■□□□□ 0.98
RNF44Q7L0R7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.2■□□□□ 0.98
RNF44Q7L0R7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF44Q7L0R7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
RNF44Q7L0R7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RNF44Q7L0R7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF44Q7L0R7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF44Q7L0R7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF44Q7L0R7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RNF44Q7L0R7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RNF44Q7L0R7 AF213884.3-201ENST00000563833 479 ntBASIC21.19■□□□□ 0.98
RNF44Q7L0R7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF44Q7L0R7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.19■□□□□ 0.98
RNF44Q7L0R7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF44Q7L0R7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF44Q7L0R7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.19■□□□□ 0.98
RNF44Q7L0R7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.18■□□□□ 0.98
RNF44Q7L0R7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.18■□□□□ 0.98
RNF44Q7L0R7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF44Q7L0R7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF44Q7L0R7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF44Q7L0R7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
RNF44Q7L0R7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF44Q7L0R7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF44Q7L0R7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.18■□□□□ 0.98
RNF44Q7L0R7 BX842568.3-201ENST00000418104 571 ntBASIC21.18■□□□□ 0.98
RNF44Q7L0R7 AC142381.2-201ENST00000566120 298 ntBASIC21.18■□□□□ 0.98
RNF44Q7L0R7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
RNF44Q7L0R7 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RNF44Q7L0R7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF44Q7L0R7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RNF44Q7L0R7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.18■□□□□ 0.98
RNF44Q7L0R7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RNF44Q7L0R7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF44Q7L0R7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.17■□□□□ 0.98
RNF44Q7L0R7 AC027682.1-201ENST00000562846 899 ntBASIC21.17■□□□□ 0.98
RNF44Q7L0R7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF44Q7L0R7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF44Q7L0R7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF44Q7L0R7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RNF44Q7L0R7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF44Q7L0R7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF44Q7L0R7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF44Q7L0R7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF44Q7L0R7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
RNF44Q7L0R7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF44Q7L0R7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF44Q7L0R7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF44Q7L0R7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
RNF44Q7L0R7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF44Q7L0R7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF44Q7L0R7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF44Q7L0R7 SLC47A1P1-202ENST00000449666 945 ntBASIC21.16■□□□□ 0.98
RNF44Q7L0R7 AC091305.1-201ENST00000479476 895 ntBASIC21.16■□□□□ 0.98
RNF44Q7L0R7 AL136967.2-201ENST00000623968 743 ntBASIC21.16■□□□□ 0.98
RNF44Q7L0R7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF44Q7L0R7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
RNF44Q7L0R7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF44Q7L0R7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF44Q7L0R7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF44Q7L0R7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF44Q7L0R7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF44Q7L0R7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF44Q7L0R7 AC004687.1-201ENST00000579003 1625 ntBASIC21.15■□□□□ 0.98
RNF44Q7L0R7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RNF44Q7L0R7 AC019069.1-201ENST00000610008 1333 ntBASIC21.15■□□□□ 0.98
RNF44Q7L0R7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF44Q7L0R7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF44Q7L0R7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF44Q7L0R7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RNF44Q7L0R7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms