Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.16■■□□□ 1.14
RAPH1Q70E73 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
RAPH1Q70E73 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RAPH1Q70E73 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.16■■□□□ 1.14
RAPH1Q70E73 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.16■■□□□ 1.14
RAPH1Q70E73 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RAPH1Q70E73 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RAPH1Q70E73 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RAPH1Q70E73 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.16■■□□□ 1.14
RAPH1Q70E73 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RAPH1Q70E73 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RAPH1Q70E73 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.15■■□□□ 1.14
RAPH1Q70E73 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
RAPH1Q70E73 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.15■■□□□ 1.14
RAPH1Q70E73 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
RAPH1Q70E73 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.15■■□□□ 1.14
RAPH1Q70E73 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.15■■□□□ 1.14
RAPH1Q70E73 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.15■■□□□ 1.14
RAPH1Q70E73 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
RAPH1Q70E73 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.15■■□□□ 1.14
RAPH1Q70E73 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC22.15■■□□□ 1.14
RAPH1Q70E73 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
RAPH1Q70E73 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RAPH1Q70E73 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.15■■□□□ 1.14
RAPH1Q70E73 ECEL1P1-201ENST00000373592 1742 ntBASIC22.14■■□□□ 1.14
RAPH1Q70E73 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.14■■□□□ 1.14
RAPH1Q70E73 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.14
RAPH1Q70E73 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.14
RAPH1Q70E73 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.14■■□□□ 1.14
RAPH1Q70E73 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC22.14■■□□□ 1.14
RAPH1Q70E73 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RAPH1Q70E73 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
RAPH1Q70E73 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.14■■□□□ 1.13
RAPH1Q70E73 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.14■■□□□ 1.13
RAPH1Q70E73 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RAPH1Q70E73 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.14■■□□□ 1.13
RAPH1Q70E73 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RAPH1Q70E73 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RAPH1Q70E73 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
RAPH1Q70E73 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.14■■□□□ 1.13
RAPH1Q70E73 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
RAPH1Q70E73 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RAPH1Q70E73 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
RAPH1Q70E73 AC144652.1-201ENST00000609974 1624 ntBASIC22.13■■□□□ 1.13
RAPH1Q70E73 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RAPH1Q70E73 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RAPH1Q70E73 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RAPH1Q70E73 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RAPH1Q70E73 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
RAPH1Q70E73 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RAPH1Q70E73 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC22.13■■□□□ 1.13
RAPH1Q70E73 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
RAPH1Q70E73 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.13■■□□□ 1.13
RAPH1Q70E73 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RAPH1Q70E73 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
RAPH1Q70E73 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RAPH1Q70E73 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RAPH1Q70E73 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.12■■□□□ 1.13
RAPH1Q70E73 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.12■■□□□ 1.13
RAPH1Q70E73 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RAPH1Q70E73 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.12■■□□□ 1.13
RAPH1Q70E73 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
RAPH1Q70E73 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.11■■□□□ 1.13
RAPH1Q70E73 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RAPH1Q70E73 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RAPH1Q70E73 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RAPH1Q70E73 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RAPH1Q70E73 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
RAPH1Q70E73 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
RAPH1Q70E73 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.11■■□□□ 1.13
RAPH1Q70E73 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
RAPH1Q70E73 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RAPH1Q70E73 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.11■■□□□ 1.13
RAPH1Q70E73 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.11■■□□□ 1.13
RAPH1Q70E73 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RAPH1Q70E73 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RAPH1Q70E73 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.11■■□□□ 1.13
RAPH1Q70E73 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RAPH1Q70E73 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.11■■□□□ 1.13
RAPH1Q70E73 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
RAPH1Q70E73 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
RAPH1Q70E73 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
RAPH1Q70E73 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.11■■□□□ 1.13
RAPH1Q70E73 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
RAPH1Q70E73 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
RAPH1Q70E73 AC242852.2-201ENST00000615738 1807 ntBASIC22.1■■□□□ 1.13
RAPH1Q70E73 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RAPH1Q70E73 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.1■■□□□ 1.13
RAPH1Q70E73 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.1■■□□□ 1.13
RAPH1Q70E73 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RAPH1Q70E73 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RAPH1Q70E73 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RAPH1Q70E73 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RAPH1Q70E73 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RAPH1Q70E73 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.1■■□□□ 1.13
RAPH1Q70E73 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RAPH1Q70E73 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
RAPH1Q70E73 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RAPH1Q70E73 AC005703.6-201ENST00000623265 1329 ntBASIC22.09■■□□□ 1.13
RAPH1Q70E73 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms