Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.32■□□□□ 0.84
PTCHD4Q6ZW05 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTCHD4Q6ZW05 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTCHD4Q6ZW05 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTCHD4Q6ZW05 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTCHD4Q6ZW05 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTCHD4Q6ZW05 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTCHD4Q6ZW05 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.31■□□□□ 0.84
PTCHD4Q6ZW05 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PTCHD4Q6ZW05 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.31■□□□□ 0.84
PTCHD4Q6ZW05 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.31■□□□□ 0.84
PTCHD4Q6ZW05 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTCHD4Q6ZW05 AC092053.2-201ENST00000640557 1818 ntBASIC20.31■□□□□ 0.84
PTCHD4Q6ZW05 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.31■□□□□ 0.84
PTCHD4Q6ZW05 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTCHD4Q6ZW05 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTCHD4Q6ZW05 AL137060.1-201ENST00000618151 2648 ntBASIC20.3■□□□□ 0.84
PTCHD4Q6ZW05 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTCHD4Q6ZW05 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTCHD4Q6ZW05 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTCHD4Q6ZW05 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.3■□□□□ 0.84
PTCHD4Q6ZW05 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PTCHD4Q6ZW05 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.3■□□□□ 0.84
PTCHD4Q6ZW05 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.3■□□□□ 0.84
PTCHD4Q6ZW05 AC012354.3-201ENST00000623734 483 ntBASIC20.3■□□□□ 0.84
PTCHD4Q6ZW05 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.3■□□□□ 0.84
PTCHD4Q6ZW05 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTCHD4Q6ZW05 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTCHD4Q6ZW05 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PTCHD4Q6ZW05 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.3■□□□□ 0.84
PTCHD4Q6ZW05 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.29■□□□□ 0.84
PTCHD4Q6ZW05 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PTCHD4Q6ZW05 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PTCHD4Q6ZW05 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTCHD4Q6ZW05 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PTCHD4Q6ZW05 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.29■□□□□ 0.84
PTCHD4Q6ZW05 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PTCHD4Q6ZW05 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.29■□□□□ 0.84
PTCHD4Q6ZW05 AL033527.3-201ENST00000566366 1196 ntBASIC20.29■□□□□ 0.84
PTCHD4Q6ZW05 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.29■□□□□ 0.84
PTCHD4Q6ZW05 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTCHD4Q6ZW05 C11orf96-202ENST00000528572 1834 ntBASIC20.29■□□□□ 0.84
PTCHD4Q6ZW05 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTCHD4Q6ZW05 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTCHD4Q6ZW05 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTCHD4Q6ZW05 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTCHD4Q6ZW05 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PTCHD4Q6ZW05 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.28■□□□□ 0.84
PTCHD4Q6ZW05 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTCHD4Q6ZW05 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTCHD4Q6ZW05 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PTCHD4Q6ZW05 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTCHD4Q6ZW05 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTCHD4Q6ZW05 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTCHD4Q6ZW05 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTCHD4Q6ZW05 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTCHD4Q6ZW05 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTCHD4Q6ZW05 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.28■□□□□ 0.84
PTCHD4Q6ZW05 AC139530.1-201ENST00000575312 1977 ntBASIC20.28■□□□□ 0.84
PTCHD4Q6ZW05 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PTCHD4Q6ZW05 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTCHD4Q6ZW05 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PTCHD4Q6ZW05 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.27■□□□□ 0.84
PTCHD4Q6ZW05 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PTCHD4Q6ZW05 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTCHD4Q6ZW05 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTCHD4Q6ZW05 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTCHD4Q6ZW05 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTCHD4Q6ZW05 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTCHD4Q6ZW05 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.27■□□□□ 0.84
PTCHD4Q6ZW05 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTCHD4Q6ZW05 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.27■□□□□ 0.84
PTCHD4Q6ZW05 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTCHD4Q6ZW05 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PTCHD4Q6ZW05 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
PTCHD4Q6ZW05 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTCHD4Q6ZW05 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTCHD4Q6ZW05 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTCHD4Q6ZW05 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTCHD4Q6ZW05 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTCHD4Q6ZW05 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
PTCHD4Q6ZW05 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.26■□□□□ 0.83
PTCHD4Q6ZW05 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.26■□□□□ 0.83
PTCHD4Q6ZW05 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTCHD4Q6ZW05 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PTCHD4Q6ZW05 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTCHD4Q6ZW05 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTCHD4Q6ZW05 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTCHD4Q6ZW05 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTCHD4Q6ZW05 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTCHD4Q6ZW05 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTCHD4Q6ZW05 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.25■□□□□ 0.83
PTCHD4Q6ZW05 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.25■□□□□ 0.83
PTCHD4Q6ZW05 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTCHD4Q6ZW05 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PTCHD4Q6ZW05 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PTCHD4Q6ZW05 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTCHD4Q6ZW05 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTCHD4Q6ZW05 AC103834.1-201ENST00000520383 144 ntBASIC20.25■□□□□ 0.83
PTCHD4Q6ZW05 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms