Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RTL4Q6ZR62 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RTL4Q6ZR62 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RTL4Q6ZR62 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RTL4Q6ZR62 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTL4Q6ZR62 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RTL4Q6ZR62 SERBP1P1-201ENST00000396021 1160 ntBASIC20.64■□□□□ 0.89
RTL4Q6ZR62 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.64■□□□□ 0.89
RTL4Q6ZR62 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.64■□□□□ 0.89
RTL4Q6ZR62 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RTL4Q6ZR62 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTL4Q6ZR62 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTL4Q6ZR62 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RTL4Q6ZR62 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.63■□□□□ 0.89
RTL4Q6ZR62 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RTL4Q6ZR62 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RTL4Q6ZR62 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.63■□□□□ 0.89
RTL4Q6ZR62 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RTL4Q6ZR62 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
RTL4Q6ZR62 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTL4Q6ZR62 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTL4Q6ZR62 ANOS2P-203ENST00000472227 1816 ntBASIC20.62■□□□□ 0.89
RTL4Q6ZR62 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.62■□□□□ 0.89
RTL4Q6ZR62 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTL4Q6ZR62 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTL4Q6ZR62 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.62■□□□□ 0.89
RTL4Q6ZR62 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.62■□□□□ 0.89
RTL4Q6ZR62 AC011298.3-201ENST00000615796 283 ntBASIC20.62■□□□□ 0.89
RTL4Q6ZR62 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTL4Q6ZR62 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTL4Q6ZR62 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTL4Q6ZR62 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTL4Q6ZR62 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTL4Q6ZR62 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
RTL4Q6ZR62 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.62■□□□□ 0.89
RTL4Q6ZR62 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RTL4Q6ZR62 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTL4Q6ZR62 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTL4Q6ZR62 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTL4Q6ZR62 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.61■□□□□ 0.89
RTL4Q6ZR62 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RTL4Q6ZR62 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTL4Q6ZR62 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RTL4Q6ZR62 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.61■□□□□ 0.89
RTL4Q6ZR62 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RTL4Q6ZR62 EDA-201ENST00000338901 1233 ntBASIC20.61■□□□□ 0.89
RTL4Q6ZR62 AC006455.2-201ENST00000429931 906 ntBASIC20.61■□□□□ 0.89
RTL4Q6ZR62 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTL4Q6ZR62 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.61■□□□□ 0.89
RTL4Q6ZR62 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.61■□□□□ 0.89
RTL4Q6ZR62 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTL4Q6ZR62 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTL4Q6ZR62 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.61■□□□□ 0.89
RTL4Q6ZR62 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTL4Q6ZR62 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
RTL4Q6ZR62 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTL4Q6ZR62 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTL4Q6ZR62 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTL4Q6ZR62 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.6■□□□□ 0.89
RTL4Q6ZR62 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RTL4Q6ZR62 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.6■□□□□ 0.89
RTL4Q6ZR62 C9orf163-202ENST00000624034 2573 ntBASIC20.6■□□□□ 0.89
RTL4Q6ZR62 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RTL4Q6ZR62 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.6■□□□□ 0.89
RTL4Q6ZR62 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.6■□□□□ 0.89
RTL4Q6ZR62 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.6■□□□□ 0.89
RTL4Q6ZR62 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RTL4Q6ZR62 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTL4Q6ZR62 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RTL4Q6ZR62 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTL4Q6ZR62 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
RTL4Q6ZR62 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTL4Q6ZR62 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
RTL4Q6ZR62 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTL4Q6ZR62 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTL4Q6ZR62 AC092068.2-201ENST00000590491 1708 ntBASIC20.59■□□□□ 0.89
RTL4Q6ZR62 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
RTL4Q6ZR62 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.59■□□□□ 0.89
RTL4Q6ZR62 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.59■□□□□ 0.89
RTL4Q6ZR62 AL355001.2-201ENST00000620617 1191 ntBASIC20.59■□□□□ 0.89
RTL4Q6ZR62 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RTL4Q6ZR62 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.59■□□□□ 0.89
RTL4Q6ZR62 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTL4Q6ZR62 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTL4Q6ZR62 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTL4Q6ZR62 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTL4Q6ZR62 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.58■□□□□ 0.89
RTL4Q6ZR62 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTL4Q6ZR62 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.58■□□□□ 0.89
RTL4Q6ZR62 AC142381.2-201ENST00000566120 298 ntBASIC20.58■□□□□ 0.89
RTL4Q6ZR62 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RTL4Q6ZR62 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RTL4Q6ZR62 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RTL4Q6ZR62 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RTL4Q6ZR62 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RTL4Q6ZR62 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.57■□□□□ 0.88
RTL4Q6ZR62 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
RTL4Q6ZR62 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTL4Q6ZR62 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTL4Q6ZR62 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms