Protein–RNA interactions for Protein: Q6PJQ5

FOXR2, Forkhead box protein R2, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2Q6PJQ5 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
FOXR2Q6PJQ5 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
FOXR2Q6PJQ5 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
FOXR2Q6PJQ5 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC24.23■■□□□ 1.47
FOXR2Q6PJQ5 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.23■■□□□ 1.47
FOXR2Q6PJQ5 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.23■■□□□ 1.47
FOXR2Q6PJQ5 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.23■■□□□ 1.47
FOXR2Q6PJQ5 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC24.23■■□□□ 1.47
FOXR2Q6PJQ5 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
FOXR2Q6PJQ5 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC24.23■■□□□ 1.47
FOXR2Q6PJQ5 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
FOXR2Q6PJQ5 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
FOXR2Q6PJQ5 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
FOXR2Q6PJQ5 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
FOXR2Q6PJQ5 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
FOXR2Q6PJQ5 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
FOXR2Q6PJQ5 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.22■■□□□ 1.47
FOXR2Q6PJQ5 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
FOXR2Q6PJQ5 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC24.22■■□□□ 1.47
FOXR2Q6PJQ5 CA15P2-201ENST00000611168 834 ntBASIC24.22■■□□□ 1.47
FOXR2Q6PJQ5 AC241377.3-202ENST00000626088 1088 ntBASIC24.22■■□□□ 1.47
FOXR2Q6PJQ5 AC241585.3-202ENST00000628937 1088 ntBASIC24.22■■□□□ 1.47
FOXR2Q6PJQ5 AC245100.8-202ENST00000629247 1058 ntBASIC24.22■■□□□ 1.47
FOXR2Q6PJQ5 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
FOXR2Q6PJQ5 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
FOXR2Q6PJQ5 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
FOXR2Q6PJQ5 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
FOXR2Q6PJQ5 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
FOXR2Q6PJQ5 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
FOXR2Q6PJQ5 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.21■■□□□ 1.47
FOXR2Q6PJQ5 AL117332.1-201ENST00000622628 974 ntBASIC24.21■■□□□ 1.47
FOXR2Q6PJQ5 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.47
FOXR2Q6PJQ5 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
FOXR2Q6PJQ5 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.47
FOXR2Q6PJQ5 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC24.2■■□□□ 1.46
FOXR2Q6PJQ5 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
FOXR2Q6PJQ5 LINC01960-201ENST00000563759 1884 ntBASIC24.2■■□□□ 1.46
FOXR2Q6PJQ5 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC24.2■■□□□ 1.46
FOXR2Q6PJQ5 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC24.2■■□□□ 1.46
FOXR2Q6PJQ5 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.2■■□□□ 1.46
FOXR2Q6PJQ5 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC24.2■■□□□ 1.46
FOXR2Q6PJQ5 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
FOXR2Q6PJQ5 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
FOXR2Q6PJQ5 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
FOXR2Q6PJQ5 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
FOXR2Q6PJQ5 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
FOXR2Q6PJQ5 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC24.2■■□□□ 1.46
FOXR2Q6PJQ5 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
FOXR2Q6PJQ5 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
FOXR2Q6PJQ5 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
FOXR2Q6PJQ5 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
FOXR2Q6PJQ5 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
FOXR2Q6PJQ5 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
FOXR2Q6PJQ5 GUSBP5-201ENST00000418136 578 ntBASIC24.19■■□□□ 1.46
FOXR2Q6PJQ5 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC24.19■■□□□ 1.46
FOXR2Q6PJQ5 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC24.19■■□□□ 1.46
FOXR2Q6PJQ5 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
FOXR2Q6PJQ5 AC092053.2-201ENST00000640557 1818 ntBASIC24.19■■□□□ 1.46
FOXR2Q6PJQ5 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC24.19■■□□□ 1.46
FOXR2Q6PJQ5 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
FOXR2Q6PJQ5 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
FOXR2Q6PJQ5 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC24.19■■□□□ 1.46
FOXR2Q6PJQ5 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
FOXR2Q6PJQ5 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
FOXR2Q6PJQ5 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC24.18■■□□□ 1.46
FOXR2Q6PJQ5 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
FOXR2Q6PJQ5 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
FOXR2Q6PJQ5 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC24.18■■□□□ 1.46
FOXR2Q6PJQ5 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
FOXR2Q6PJQ5 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC24.18■■□□□ 1.46
FOXR2Q6PJQ5 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
FOXR2Q6PJQ5 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
FOXR2Q6PJQ5 AC080038.3-201ENST00000623346 1952 ntBASIC24.18■■□□□ 1.46
FOXR2Q6PJQ5 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
FOXR2Q6PJQ5 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
FOXR2Q6PJQ5 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
FOXR2Q6PJQ5 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
FOXR2Q6PJQ5 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
FOXR2Q6PJQ5 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
FOXR2Q6PJQ5 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.17■■□□□ 1.46
FOXR2Q6PJQ5 KRT16P3-201ENST00000439127 1283 ntBASIC24.17■■□□□ 1.46
FOXR2Q6PJQ5 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
FOXR2Q6PJQ5 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC24.17■■□□□ 1.46
FOXR2Q6PJQ5 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
FOXR2Q6PJQ5 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
FOXR2Q6PJQ5 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
FOXR2Q6PJQ5 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC24.17■■□□□ 1.46
FOXR2Q6PJQ5 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
FOXR2Q6PJQ5 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
FOXR2Q6PJQ5 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
FOXR2Q6PJQ5 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.16■■□□□ 1.46
FOXR2Q6PJQ5 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
FOXR2Q6PJQ5 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC24.16■■□□□ 1.46
FOXR2Q6PJQ5 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC24.16■■□□□ 1.46
FOXR2Q6PJQ5 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
FOXR2Q6PJQ5 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
FOXR2Q6PJQ5 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
FOXR2Q6PJQ5 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC24.16■■□□□ 1.46
FOXR2Q6PJQ5 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC24.16■■□□□ 1.46
FOXR2Q6PJQ5 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.16■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms