Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PPP4R3AQ6IN85 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
PPP4R3AQ6IN85 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
PPP4R3AQ6IN85 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
PPP4R3AQ6IN85 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
PPP4R3AQ6IN85 AC110285.6-201ENST00000617652 491 ntBASIC25.17■■□□□ 1.62
PPP4R3AQ6IN85 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
PPP4R3AQ6IN85 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC25.17■■□□□ 1.62
PPP4R3AQ6IN85 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC25.17■■□□□ 1.62
PPP4R3AQ6IN85 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PPP4R3AQ6IN85 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC25.17■■□□□ 1.62
PPP4R3AQ6IN85 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PPP4R3AQ6IN85 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
PPP4R3AQ6IN85 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC25.16■■□□□ 1.62
PPP4R3AQ6IN85 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PPP4R3AQ6IN85 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC25.16■■□□□ 1.62
PPP4R3AQ6IN85 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PPP4R3AQ6IN85 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC25.16■■□□□ 1.62
PPP4R3AQ6IN85 AL136162.1-201ENST00000607711 1078 ntBASIC25.16■■□□□ 1.62
PPP4R3AQ6IN85 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
PPP4R3AQ6IN85 AC136469.2-201ENST00000623944 1028 ntBASIC25.16■■□□□ 1.62
PPP4R3AQ6IN85 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PPP4R3AQ6IN85 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PPP4R3AQ6IN85 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC25.16■■□□□ 1.62
PPP4R3AQ6IN85 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PPP4R3AQ6IN85 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PPP4R3AQ6IN85 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC25.15■■□□□ 1.62
PPP4R3AQ6IN85 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC25.15■■□□□ 1.62
PPP4R3AQ6IN85 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PPP4R3AQ6IN85 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PPP4R3AQ6IN85 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PPP4R3AQ6IN85 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
PPP4R3AQ6IN85 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC25.14■■□□□ 1.62
PPP4R3AQ6IN85 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.62
PPP4R3AQ6IN85 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
PPP4R3AQ6IN85 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC25.14■■□□□ 1.62
PPP4R3AQ6IN85 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
PPP4R3AQ6IN85 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC25.14■■□□□ 1.62
PPP4R3AQ6IN85 NALT1-201ENST00000429224 738 ntTSL 5 BASIC25.14■■□□□ 1.62
PPP4R3AQ6IN85 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.14■■□□□ 1.62
PPP4R3AQ6IN85 AC024257.2-201ENST00000549699 147 ntBASIC25.14■■□□□ 1.62
PPP4R3AQ6IN85 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.14■■□□□ 1.62
PPP4R3AQ6IN85 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC25.14■■□□□ 1.62
PPP4R3AQ6IN85 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC25.14■■□□□ 1.61
PPP4R3AQ6IN85 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC25.13■■□□□ 1.61
PPP4R3AQ6IN85 AC135279.3-201ENST00000610945 1311 ntBASIC25.13■■□□□ 1.61
PPP4R3AQ6IN85 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
PPP4R3AQ6IN85 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PPP4R3AQ6IN85 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.13■■□□□ 1.61
PPP4R3AQ6IN85 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PPP4R3AQ6IN85 AL139246.5-201ENST00000606645 996 ntBASIC25.13■■□□□ 1.61
PPP4R3AQ6IN85 AC106739.1-201ENST00000617035 715 ntBASIC25.13■■□□□ 1.61
PPP4R3AQ6IN85 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PPP4R3AQ6IN85 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PPP4R3AQ6IN85 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PPP4R3AQ6IN85 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC25.13■■□□□ 1.61
PPP4R3AQ6IN85 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC25.13■■□□□ 1.61
PPP4R3AQ6IN85 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC25.12■■□□□ 1.61
PPP4R3AQ6IN85 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PPP4R3AQ6IN85 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PPP4R3AQ6IN85 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PPP4R3AQ6IN85 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
PPP4R3AQ6IN85 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC25.12■■□□□ 1.61
PPP4R3AQ6IN85 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
PPP4R3AQ6IN85 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
PPP4R3AQ6IN85 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PPP4R3AQ6IN85 GCA-201ENST00000233612 1694 ntTSL 2 BASIC25.12■■□□□ 1.61
PPP4R3AQ6IN85 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PPP4R3AQ6IN85 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PPP4R3AQ6IN85 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC25.12■■□□□ 1.61
PPP4R3AQ6IN85 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC25.12■■□□□ 1.61
PPP4R3AQ6IN85 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
PPP4R3AQ6IN85 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC25.11■■□□□ 1.61
PPP4R3AQ6IN85 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PPP4R3AQ6IN85 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.11■■□□□ 1.61
PPP4R3AQ6IN85 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC25.11■■□□□ 1.61
PPP4R3AQ6IN85 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
PPP4R3AQ6IN85 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
PPP4R3AQ6IN85 AC004687.1-201ENST00000579003 1625 ntBASIC25.11■■□□□ 1.61
PPP4R3AQ6IN85 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC25.11■■□□□ 1.61
PPP4R3AQ6IN85 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PPP4R3AQ6IN85 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
PPP4R3AQ6IN85 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.1■■□□□ 1.61
PPP4R3AQ6IN85 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC25.1■■□□□ 1.61
PPP4R3AQ6IN85 PBX2P1-201ENST00000493219 1291 ntBASIC25.1■■□□□ 1.61
PPP4R3AQ6IN85 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC25.1■■□□□ 1.61
PPP4R3AQ6IN85 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
PPP4R3AQ6IN85 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PPP4R3AQ6IN85 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PPP4R3AQ6IN85 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
PPP4R3AQ6IN85 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PPP4R3AQ6IN85 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PPP4R3AQ6IN85 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC25.09■■□□□ 1.61
PPP4R3AQ6IN85 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PPP4R3AQ6IN85 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PPP4R3AQ6IN85 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
PPP4R3AQ6IN85 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC25.09■■□□□ 1.61
PPP4R3AQ6IN85 AC133561.4-201ENST00000566112 224 ntBASIC25.09■■□□□ 1.61
PPP4R3AQ6IN85 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC25.09■■□□□ 1.61
PPP4R3AQ6IN85 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms