Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
HLA-DQA1Q5Y7H0 MIR3181-201ENST00000578512 73 ntBASIC20.61■□□□□ 0.89
HLA-DQA1Q5Y7H0 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.61■□□□□ 0.89
HLA-DQA1Q5Y7H0 AL136162.1-201ENST00000607711 1078 ntBASIC20.61■□□□□ 0.89
HLA-DQA1Q5Y7H0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
HLA-DQA1Q5Y7H0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.61■□□□□ 0.89
HLA-DQA1Q5Y7H0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.61■□□□□ 0.89
HLA-DQA1Q5Y7H0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DQA1Q5Y7H0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DQA1Q5Y7H0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.6■□□□□ 0.89
HLA-DQA1Q5Y7H0 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DQA1Q5Y7H0 PKD1P6-201ENST00000343738 4769 ntBASIC20.6■□□□□ 0.89
HLA-DQA1Q5Y7H0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DQA1Q5Y7H0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DQA1Q5Y7H0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.6■□□□□ 0.89
HLA-DQA1Q5Y7H0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
HLA-DQA1Q5Y7H0 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.6■□□□□ 0.89
HLA-DQA1Q5Y7H0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.6■□□□□ 0.89
HLA-DQA1Q5Y7H0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.6■□□□□ 0.89
HLA-DQA1Q5Y7H0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.6■□□□□ 0.89
HLA-DQA1Q5Y7H0 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
HLA-DQA1Q5Y7H0 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DQA1Q5Y7H0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DQA1Q5Y7H0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DQA1Q5Y7H0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DQA1Q5Y7H0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DQA1Q5Y7H0 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.59■□□□□ 0.89
HLA-DQA1Q5Y7H0 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DQA1Q5Y7H0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DQA1Q5Y7H0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.59■□□□□ 0.89
HLA-DQA1Q5Y7H0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DQA1Q5Y7H0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DQA1Q5Y7H0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DQA1Q5Y7H0 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DQA1Q5Y7H0 AL499627.2-201ENST00000606283 725 ntBASIC20.59■□□□□ 0.89
HLA-DQA1Q5Y7H0 DUSP8P5-201ENST00000422884 1815 ntBASIC20.59■□□□□ 0.89
HLA-DQA1Q5Y7H0 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DQA1Q5Y7H0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DQA1Q5Y7H0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-DQA1Q5Y7H0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-DQA1Q5Y7H0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.89
HLA-DQA1Q5Y7H0 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.58■□□□□ 0.89
HLA-DQA1Q5Y7H0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-DQA1Q5Y7H0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.58■□□□□ 0.89
HLA-DQA1Q5Y7H0 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.58■□□□□ 0.89
HLA-DQA1Q5Y7H0 PBX2P1-201ENST00000493219 1291 ntBASIC20.58■□□□□ 0.89
HLA-DQA1Q5Y7H0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-DQA1Q5Y7H0 AC011298.3-201ENST00000615796 283 ntBASIC20.58■□□□□ 0.89
HLA-DQA1Q5Y7H0 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HLA-DQA1Q5Y7H0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HLA-DQA1Q5Y7H0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HLA-DQA1Q5Y7H0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.58■□□□□ 0.88
HLA-DQA1Q5Y7H0 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HLA-DQA1Q5Y7H0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
HLA-DQA1Q5Y7H0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
HLA-DQA1Q5Y7H0 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HLA-DQA1Q5Y7H0 AC135279.3-201ENST00000610945 1311 ntBASIC20.57■□□□□ 0.88
HLA-DQA1Q5Y7H0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DQA1Q5Y7H0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DQA1Q5Y7H0 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DQA1Q5Y7H0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DQA1Q5Y7H0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
HLA-DQA1Q5Y7H0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.57■□□□□ 0.88
HLA-DQA1Q5Y7H0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.57■□□□□ 0.88
HLA-DQA1Q5Y7H0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.57■□□□□ 0.88
HLA-DQA1Q5Y7H0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DQA1Q5Y7H0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DQA1Q5Y7H0 AC133637.1-201ENST00000624115 1537 ntBASIC20.57■□□□□ 0.88
HLA-DQA1Q5Y7H0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DQA1Q5Y7H0 DUSP8P3-201ENST00000399571 1760 ntBASIC20.57■□□□□ 0.88
HLA-DQA1Q5Y7H0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
HLA-DQA1Q5Y7H0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DQA1Q5Y7H0 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.56■□□□□ 0.88
HLA-DQA1Q5Y7H0 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.56■□□□□ 0.88
HLA-DQA1Q5Y7H0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DQA1Q5Y7H0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.56■□□□□ 0.88
HLA-DQA1Q5Y7H0 AL139246.5-201ENST00000606645 996 ntBASIC20.56■□□□□ 0.88
HLA-DQA1Q5Y7H0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DQA1Q5Y7H0 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DQA1Q5Y7H0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.56■□□□□ 0.88
HLA-DQA1Q5Y7H0 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DQA1Q5Y7H0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DQA1Q5Y7H0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.55■□□□□ 0.88
HLA-DQA1Q5Y7H0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DQA1Q5Y7H0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.55■□□□□ 0.88
HLA-DQA1Q5Y7H0 AC024257.2-201ENST00000549699 147 ntBASIC20.55■□□□□ 0.88
HLA-DQA1Q5Y7H0 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
HLA-DQA1Q5Y7H0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
HLA-DQA1Q5Y7H0 AC110285.6-201ENST00000617652 491 ntBASIC20.55■□□□□ 0.88
HLA-DQA1Q5Y7H0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.55■□□□□ 0.88
HLA-DQA1Q5Y7H0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DQA1Q5Y7H0 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DQA1Q5Y7H0 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DQA1Q5Y7H0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DQA1Q5Y7H0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DQA1Q5Y7H0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.54■□□□□ 0.88
HLA-DQA1Q5Y7H0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DQA1Q5Y7H0 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.54■□□□□ 0.88
HLA-DQA1Q5Y7H0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.54■□□□□ 0.88
HLA-DQA1Q5Y7H0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms