Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TTC39BQ5VTQ0 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TTC39BQ5VTQ0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TTC39BQ5VTQ0 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.03■■□□□ 1.28
TTC39BQ5VTQ0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.03■■□□□ 1.28
TTC39BQ5VTQ0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TTC39BQ5VTQ0 AC024257.2-201ENST00000549699 147 ntBASIC23.03■■□□□ 1.28
TTC39BQ5VTQ0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TTC39BQ5VTQ0 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.03■■□□□ 1.28
TTC39BQ5VTQ0 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.03■■□□□ 1.28
TTC39BQ5VTQ0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.03■■□□□ 1.28
TTC39BQ5VTQ0 ANOS2P-203ENST00000472227 1816 ntBASIC23.03■■□□□ 1.28
TTC39BQ5VTQ0 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.03■■□□□ 1.28
TTC39BQ5VTQ0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TTC39BQ5VTQ0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
TTC39BQ5VTQ0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
TTC39BQ5VTQ0 LINC01529-204ENST00000636474 1715 ntBASIC23.02■■□□□ 1.28
TTC39BQ5VTQ0 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TTC39BQ5VTQ0 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.02■■□□□ 1.28
TTC39BQ5VTQ0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.02■■□□□ 1.28
TTC39BQ5VTQ0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.02■■□□□ 1.28
TTC39BQ5VTQ0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.02■■□□□ 1.28
TTC39BQ5VTQ0 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
TTC39BQ5VTQ0 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
TTC39BQ5VTQ0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.01■■□□□ 1.27
TTC39BQ5VTQ0 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
TTC39BQ5VTQ0 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TTC39BQ5VTQ0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.01■■□□□ 1.27
TTC39BQ5VTQ0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
TTC39BQ5VTQ0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TTC39BQ5VTQ0 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.01■■□□□ 1.27
TTC39BQ5VTQ0 MIR3181-201ENST00000578512 73 ntBASIC23.01■■□□□ 1.27
TTC39BQ5VTQ0 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.01■■□□□ 1.27
TTC39BQ5VTQ0 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
TTC39BQ5VTQ0 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.01■■□□□ 1.27
TTC39BQ5VTQ0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
TTC39BQ5VTQ0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TTC39BQ5VTQ0 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23■■□□□ 1.27
TTC39BQ5VTQ0 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TTC39BQ5VTQ0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23■■□□□ 1.27
TTC39BQ5VTQ0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23■■□□□ 1.27
TTC39BQ5VTQ0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TTC39BQ5VTQ0 EDA-201ENST00000338901 1233 ntBASIC23■■□□□ 1.27
TTC39BQ5VTQ0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23■■□□□ 1.27
TTC39BQ5VTQ0 AC136469.2-201ENST00000623944 1028 ntBASIC23■■□□□ 1.27
TTC39BQ5VTQ0 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23■■□□□ 1.27
TTC39BQ5VTQ0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23■■□□□ 1.27
TTC39BQ5VTQ0 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TTC39BQ5VTQ0 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TTC39BQ5VTQ0 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TTC39BQ5VTQ0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.99■■□□□ 1.27
TTC39BQ5VTQ0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TTC39BQ5VTQ0 pRNA.6-201ENST00000610482 90 ntBASIC22.99■■□□□ 1.27
TTC39BQ5VTQ0 pRNA.5-201ENST00000612139 90 ntBASIC22.99■■□□□ 1.27
TTC39BQ5VTQ0 pRNA.11-201ENST00000618423 90 ntBASIC22.99■■□□□ 1.27
TTC39BQ5VTQ0 pRNA.13-201ENST00000619112 90 ntBASIC22.99■■□□□ 1.27
TTC39BQ5VTQ0 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TTC39BQ5VTQ0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.99■■□□□ 1.27
TTC39BQ5VTQ0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.99■■□□□ 1.27
TTC39BQ5VTQ0 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TTC39BQ5VTQ0 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
TTC39BQ5VTQ0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.99■■□□□ 1.27
TTC39BQ5VTQ0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.98■■□□□ 1.27
TTC39BQ5VTQ0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
TTC39BQ5VTQ0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
TTC39BQ5VTQ0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.98■■□□□ 1.27
TTC39BQ5VTQ0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.98■■□□□ 1.27
TTC39BQ5VTQ0 AL499627.2-201ENST00000606283 725 ntBASIC22.98■■□□□ 1.27
TTC39BQ5VTQ0 AC079630.1-202ENST00000618127 1840 ntBASIC22.98■■□□□ 1.27
TTC39BQ5VTQ0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
TTC39BQ5VTQ0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
TTC39BQ5VTQ0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TTC39BQ5VTQ0 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TTC39BQ5VTQ0 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TTC39BQ5VTQ0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
TTC39BQ5VTQ0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
TTC39BQ5VTQ0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.97■■□□□ 1.27
TTC39BQ5VTQ0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.97■■□□□ 1.27
TTC39BQ5VTQ0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.97■■□□□ 1.27
TTC39BQ5VTQ0 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TTC39BQ5VTQ0 AC092068.2-201ENST00000590491 1708 ntBASIC22.96■■□□□ 1.27
TTC39BQ5VTQ0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.96■■□□□ 1.27
TTC39BQ5VTQ0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.96■■□□□ 1.27
TTC39BQ5VTQ0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.96■■□□□ 1.27
TTC39BQ5VTQ0 AL117328.2-201ENST00000624617 1940 ntBASIC22.96■■□□□ 1.27
TTC39BQ5VTQ0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
TTC39BQ5VTQ0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TTC39BQ5VTQ0 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TTC39BQ5VTQ0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
TTC39BQ5VTQ0 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TTC39BQ5VTQ0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.96■■□□□ 1.27
TTC39BQ5VTQ0 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TTC39BQ5VTQ0 MIR4767-201ENST00000582827 78 ntBASIC22.96■■□□□ 1.27
TTC39BQ5VTQ0 AC005837.3-201ENST00000612163 286 ntBASIC22.96■■□□□ 1.27
TTC39BQ5VTQ0 AL355001.2-201ENST00000620617 1191 ntBASIC22.96■■□□□ 1.27
TTC39BQ5VTQ0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TTC39BQ5VTQ0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
TTC39BQ5VTQ0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TTC39BQ5VTQ0 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.96■■□□□ 1.27
TTC39BQ5VTQ0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms