Protein–RNA interactions for Protein: Q5TCZ1

SH3PXD2A, SH3 and PX domain-containing protein 2A, humanhuman

Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2AQ5TCZ1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SH3PXD2AQ5TCZ1 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SH3PXD2AQ5TCZ1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.23■■□□□ 1.31
SH3PXD2AQ5TCZ1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SH3PXD2AQ5TCZ1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SH3PXD2AQ5TCZ1 AC006455.2-201ENST00000429931 906 ntBASIC23.23■■□□□ 1.31
SH3PXD2AQ5TCZ1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
SH3PXD2AQ5TCZ1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SH3PXD2AQ5TCZ1 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SH3PXD2AQ5TCZ1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.23■■□□□ 1.31
SH3PXD2AQ5TCZ1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SH3PXD2AQ5TCZ1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.22■■□□□ 1.31
SH3PXD2AQ5TCZ1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SH3PXD2AQ5TCZ1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
SH3PXD2AQ5TCZ1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SH3PXD2AQ5TCZ1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.22■■□□□ 1.31
SH3PXD2AQ5TCZ1 AC099791.2-201ENST00000605725 427 ntBASIC23.22■■□□□ 1.31
SH3PXD2AQ5TCZ1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.22■■□□□ 1.31
SH3PXD2AQ5TCZ1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.22■■□□□ 1.31
SH3PXD2AQ5TCZ1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.22■■□□□ 1.31
SH3PXD2AQ5TCZ1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SH3PXD2AQ5TCZ1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
SH3PXD2AQ5TCZ1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.22■■□□□ 1.31
SH3PXD2AQ5TCZ1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SH3PXD2AQ5TCZ1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SH3PXD2AQ5TCZ1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.21■■□□□ 1.31
SH3PXD2AQ5TCZ1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SH3PXD2AQ5TCZ1 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.21■■□□□ 1.31
SH3PXD2AQ5TCZ1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.21■■□□□ 1.31
SH3PXD2AQ5TCZ1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SH3PXD2AQ5TCZ1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SH3PXD2AQ5TCZ1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
SH3PXD2AQ5TCZ1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SH3PXD2AQ5TCZ1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SH3PXD2AQ5TCZ1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
SH3PXD2AQ5TCZ1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
SH3PXD2AQ5TCZ1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SH3PXD2AQ5TCZ1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.2■■□□□ 1.3
SH3PXD2AQ5TCZ1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.2■■□□□ 1.3
SH3PXD2AQ5TCZ1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.2■■□□□ 1.3
SH3PXD2AQ5TCZ1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SH3PXD2AQ5TCZ1 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.2■■□□□ 1.3
SH3PXD2AQ5TCZ1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.2■■□□□ 1.3
SH3PXD2AQ5TCZ1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SH3PXD2AQ5TCZ1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SH3PXD2AQ5TCZ1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
SH3PXD2AQ5TCZ1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.19■■□□□ 1.3
SH3PXD2AQ5TCZ1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
SH3PXD2AQ5TCZ1 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SH3PXD2AQ5TCZ1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.19■■□□□ 1.3
SH3PXD2AQ5TCZ1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SH3PXD2AQ5TCZ1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SH3PXD2AQ5TCZ1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
SH3PXD2AQ5TCZ1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.19■■□□□ 1.3
SH3PXD2AQ5TCZ1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.19■■□□□ 1.3
SH3PXD2AQ5TCZ1 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SH3PXD2AQ5TCZ1 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SH3PXD2AQ5TCZ1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SH3PXD2AQ5TCZ1 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.19■■□□□ 1.3
SH3PXD2AQ5TCZ1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
SH3PXD2AQ5TCZ1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.18■■□□□ 1.3
SH3PXD2AQ5TCZ1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.18■■□□□ 1.3
SH3PXD2AQ5TCZ1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SH3PXD2AQ5TCZ1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SH3PXD2AQ5TCZ1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.18■■□□□ 1.3
SH3PXD2AQ5TCZ1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.18■■□□□ 1.3
SH3PXD2AQ5TCZ1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
SH3PXD2AQ5TCZ1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
SH3PXD2AQ5TCZ1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SH3PXD2AQ5TCZ1 UNC93B3-201ENST00000308076 687 ntBASIC23.17■■□□□ 1.3
SH3PXD2AQ5TCZ1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.17■■□□□ 1.3
SH3PXD2AQ5TCZ1 SRD5A1P1-201ENST00000442297 786 ntBASIC23.17■■□□□ 1.3
SH3PXD2AQ5TCZ1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SH3PXD2AQ5TCZ1 SUDS3P1-201ENST00000505831 966 ntBASIC23.17■■□□□ 1.3
SH3PXD2AQ5TCZ1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.17■■□□□ 1.3
SH3PXD2AQ5TCZ1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SH3PXD2AQ5TCZ1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SH3PXD2AQ5TCZ1 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SH3PXD2AQ5TCZ1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.17■■□□□ 1.3
SH3PXD2AQ5TCZ1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.16■■□□□ 1.3
SH3PXD2AQ5TCZ1 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SH3PXD2AQ5TCZ1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SH3PXD2AQ5TCZ1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.16■■□□□ 1.3
SH3PXD2AQ5TCZ1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
SH3PXD2AQ5TCZ1 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SH3PXD2AQ5TCZ1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
SH3PXD2AQ5TCZ1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.16■■□□□ 1.3
SH3PXD2AQ5TCZ1 AL031432.3-201ENST00000607698 485 ntBASIC23.16■■□□□ 1.3
SH3PXD2AQ5TCZ1 AC009086.3-201ENST00000623486 1008 ntBASIC23.16■■□□□ 1.3
SH3PXD2AQ5TCZ1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
SH3PXD2AQ5TCZ1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SH3PXD2AQ5TCZ1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.16■■□□□ 1.3
SH3PXD2AQ5TCZ1 AC012676.1-201ENST00000574705 1949 ntBASIC23.16■■□□□ 1.3
SH3PXD2AQ5TCZ1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SH3PXD2AQ5TCZ1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SH3PXD2AQ5TCZ1 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.15■■□□□ 1.3
SH3PXD2AQ5TCZ1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SH3PXD2AQ5TCZ1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SH3PXD2AQ5TCZ1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SH3PXD2AQ5TCZ1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms