Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDCD4Q53EL6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
PDCD4Q53EL6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
PDCD4Q53EL6 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDCD4Q53EL6 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PDCD4Q53EL6 MIR4508-201ENST00000584178 70 ntBASIC21.26■□□□□ 0.99
PDCD4Q53EL6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDCD4Q53EL6 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDCD4Q53EL6 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDCD4Q53EL6 AC080038.3-201ENST00000623346 1952 ntBASIC21.26■□□□□ 0.99
PDCD4Q53EL6 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDCD4Q53EL6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDCD4Q53EL6 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.25■□□□□ 0.99
PDCD4Q53EL6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PDCD4Q53EL6 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDCD4Q53EL6 TSPY13P-201ENST00000338964 914 ntBASIC21.25■□□□□ 0.99
PDCD4Q53EL6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDCD4Q53EL6 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.25■□□□□ 0.99
PDCD4Q53EL6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.25■□□□□ 0.99
PDCD4Q53EL6 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
PDCD4Q53EL6 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDCD4Q53EL6 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PDCD4Q53EL6 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDCD4Q53EL6 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.25■□□□□ 0.99
PDCD4Q53EL6 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.25■□□□□ 0.99
PDCD4Q53EL6 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDCD4Q53EL6 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDCD4Q53EL6 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
PDCD4Q53EL6 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PDCD4Q53EL6 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PDCD4Q53EL6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PDCD4Q53EL6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDCD4Q53EL6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
PDCD4Q53EL6 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDCD4Q53EL6 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDCD4Q53EL6 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.24■□□□□ 0.99
PDCD4Q53EL6 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDCD4Q53EL6 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.23■□□□□ 0.99
PDCD4Q53EL6 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDCD4Q53EL6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
PDCD4Q53EL6 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.23■□□□□ 0.99
PDCD4Q53EL6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PDCD4Q53EL6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.23■□□□□ 0.99
PDCD4Q53EL6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDCD4Q53EL6 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDCD4Q53EL6 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
PDCD4Q53EL6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDCD4Q53EL6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDCD4Q53EL6 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDCD4Q53EL6 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDCD4Q53EL6 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDCD4Q53EL6 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.22■□□□□ 0.99
PDCD4Q53EL6 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.22■□□□□ 0.99
PDCD4Q53EL6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDCD4Q53EL6 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDCD4Q53EL6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PDCD4Q53EL6 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDCD4Q53EL6 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PDCD4Q53EL6 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDCD4Q53EL6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDCD4Q53EL6 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.21■□□□□ 0.99
PDCD4Q53EL6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDCD4Q53EL6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.21■□□□□ 0.99
PDCD4Q53EL6 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.21■□□□□ 0.99
PDCD4Q53EL6 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.21■□□□□ 0.99
PDCD4Q53EL6 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.21■□□□□ 0.99
PDCD4Q53EL6 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.21■□□□□ 0.99
PDCD4Q53EL6 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PDCD4Q53EL6 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDCD4Q53EL6 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
PDCD4Q53EL6 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDCD4Q53EL6 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDCD4Q53EL6 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.2■□□□□ 0.98
PDCD4Q53EL6 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDCD4Q53EL6 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDCD4Q53EL6 AC007375.3-201ENST00000600936 2314 ntBASIC21.2■□□□□ 0.98
PDCD4Q53EL6 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.19■□□□□ 0.98
PDCD4Q53EL6 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.19■□□□□ 0.98
PDCD4Q53EL6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDCD4Q53EL6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDCD4Q53EL6 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.19■□□□□ 0.98
PDCD4Q53EL6 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.19■□□□□ 0.98
PDCD4Q53EL6 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDCD4Q53EL6 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDCD4Q53EL6 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
PDCD4Q53EL6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PDCD4Q53EL6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PDCD4Q53EL6 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PDCD4Q53EL6 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDCD4Q53EL6 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.18■□□□□ 0.98
PDCD4Q53EL6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PDCD4Q53EL6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
PDCD4Q53EL6 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PDCD4Q53EL6 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
PDCD4Q53EL6 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDCD4Q53EL6 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PDCD4Q53EL6 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDCD4Q53EL6 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDCD4Q53EL6 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDCD4Q53EL6 LINC01529-204ENST00000636474 1715 ntBASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms