Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
USH1GQ495M9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC25.48■■□□□ 1.67
USH1GQ495M9 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
USH1GQ495M9 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC25.48■■□□□ 1.67
USH1GQ495M9 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC25.48■■□□□ 1.67
USH1GQ495M9 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
USH1GQ495M9 JTB-203ENST00000368589 1216 ntTSL 2 BASIC25.48■■□□□ 1.67
USH1GQ495M9 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
USH1GQ495M9 AICDA-202ENST00000537228 667 ntTSL 5 BASIC25.48■■□□□ 1.67
USH1GQ495M9 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
USH1GQ495M9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
USH1GQ495M9 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
USH1GQ495M9 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
USH1GQ495M9 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
USH1GQ495M9 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC25.47■■□□□ 1.67
USH1GQ495M9 STX4-202ENST00000394998 1498 ntTSL 2 BASIC25.47■■□□□ 1.67
USH1GQ495M9 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
USH1GQ495M9 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC25.47■■□□□ 1.67
USH1GQ495M9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC25.47■■□□□ 1.67
USH1GQ495M9 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
USH1GQ495M9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
USH1GQ495M9 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC25.47■■□□□ 1.67
USH1GQ495M9 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.47■■□□□ 1.67
USH1GQ495M9 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
USH1GQ495M9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC25.47■■□□□ 1.67
USH1GQ495M9 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
USH1GQ495M9 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC25.46■■□□□ 1.67
USH1GQ495M9 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
USH1GQ495M9 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
USH1GQ495M9 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
USH1GQ495M9 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC25.46■■□□□ 1.67
USH1GQ495M9 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC25.46■■□□□ 1.67
USH1GQ495M9 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
USH1GQ495M9 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
USH1GQ495M9 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
USH1GQ495M9 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.67
USH1GQ495M9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC25.45■■□□□ 1.66
USH1GQ495M9 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC25.45■■□□□ 1.66
USH1GQ495M9 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
USH1GQ495M9 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
USH1GQ495M9 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
USH1GQ495M9 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC25.45■■□□□ 1.66
USH1GQ495M9 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC25.45■■□□□ 1.66
USH1GQ495M9 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
USH1GQ495M9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC25.44■■□□□ 1.66
USH1GQ495M9 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
USH1GQ495M9 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC25.44■■□□□ 1.66
USH1GQ495M9 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
USH1GQ495M9 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
USH1GQ495M9 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC25.44■■□□□ 1.66
USH1GQ495M9 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC25.44■■□□□ 1.66
USH1GQ495M9 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC25.44■■□□□ 1.66
USH1GQ495M9 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
USH1GQ495M9 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC25.44■■□□□ 1.66
USH1GQ495M9 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC25.44■■□□□ 1.66
USH1GQ495M9 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC25.44■■□□□ 1.66
USH1GQ495M9 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
USH1GQ495M9 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
USH1GQ495M9 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
USH1GQ495M9 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC25.44■■□□□ 1.66
USH1GQ495M9 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
USH1GQ495M9 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
USH1GQ495M9 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
USH1GQ495M9 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
USH1GQ495M9 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC25.43■■□□□ 1.66
USH1GQ495M9 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
USH1GQ495M9 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC25.43■■□□□ 1.66
USH1GQ495M9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
USH1GQ495M9 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC25.43■■□□□ 1.66
USH1GQ495M9 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
USH1GQ495M9 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
USH1GQ495M9 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC25.42■■□□□ 1.66
USH1GQ495M9 SP2-202ENST00000613139 908 ntTSL 5 BASIC25.42■■□□□ 1.66
USH1GQ495M9 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
USH1GQ495M9 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
USH1GQ495M9 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
USH1GQ495M9 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC25.42■■□□□ 1.66
USH1GQ495M9 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
USH1GQ495M9 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
USH1GQ495M9 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
USH1GQ495M9 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC25.41■■□□□ 1.66
USH1GQ495M9 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
USH1GQ495M9 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
USH1GQ495M9 AC087623.3-201ENST00000607047 1098 ntBASIC25.41■■□□□ 1.66
USH1GQ495M9 MIR6821-201ENST00000617625 74 ntBASIC25.41■■□□□ 1.66
USH1GQ495M9 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC25.41■■□□□ 1.66
USH1GQ495M9 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.41■■□□□ 1.66
USH1GQ495M9 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
USH1GQ495M9 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC25.41■■□□□ 1.66
USH1GQ495M9 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
USH1GQ495M9 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
USH1GQ495M9 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
USH1GQ495M9 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
USH1GQ495M9 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC25.4■■□□□ 1.66
USH1GQ495M9 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
USH1GQ495M9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC25.4■■□□□ 1.66
USH1GQ495M9 AC097381.1-201ENST00000429019 1296 ntBASIC25.4■■□□□ 1.66
USH1GQ495M9 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC25.4■■□□□ 1.66
USH1GQ495M9 MIR5787-201ENST00000611784 55 ntBASIC25.4■■□□□ 1.66
USH1GQ495M9 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms