Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 UTP23YOR004W 765 nt3.49□□□□□ -1.85
VPS13Q07878 YKL033W-AYKL033W-A 711 nt3.48□□□□□ -1.85
VPS13Q07878 EXO5YBR163W 1758 nt3.48□□□□□ -1.85
VPS13Q07878 VAS1YGR094W 3315 nt3.48□□□□□ -1.85
VPS13Q07878 YME2YMR302C 2553 nt3.48□□□□□ -1.85
VPS13Q07878 MPC54YOR177C 1395 nt3.48□□□□□ -1.85
VPS13Q07878 YLR296WYLR296W 327 nt3.48□□□□□ -1.85
VPS13Q07878 SIW14YNL032W 846 nt3.48□□□□□ -1.85
VPS13Q07878 ARN2YHL047C 1863 nt3.48□□□□□ -1.85
VPS13Q07878 YGR051CYGR051C 324 nt3.48□□□□□ -1.85
VPS13Q07878 DOG2YHR043C 741 nt3.48□□□□□ -1.85
VPS13Q07878 ROG3YFR022W 2202 nt3.47□□□□□ -1.85
VPS13Q07878 NOP4YPL043W 2058 nt3.47□□□□□ -1.85
VPS13Q07878 VPS64YDR200C 1815 nt3.47□□□□□ -1.85
VPS13Q07878 BUD14YAR014C 2130 nt3.47□□□□□ -1.85
VPS13Q07878 ZRC1YMR243C 1329 nt3.47□□□□□ -1.85
VPS13Q07878 DSF2YBR007C 2211 nt3.47□□□□□ -1.85
VPS13Q07878 RSC4YKR008W 1878 nt3.47□□□□□ -1.85
VPS13Q07878 ECM2YBR065C 1095 nt3.47□□□□□ -1.85
VPS13Q07878 MDR1YGR100W 2853 nt3.46□□□□□ -1.85
VPS13Q07878 DGK1YOR311C 873 nt3.46□□□□□ -1.86
VPS13Q07878 RPA135YPR010C 3612 nt3.46□□□□□ -1.86
VPS13Q07878 AVT1YJR001W 1809 nt3.46□□□□□ -1.86
VPS13Q07878 PPH3YDR075W 927 nt3.46□□□□□ -1.86
VPS13Q07878 ECM34YHL043W 513 nt3.46□□□□□ -1.86
VPS13Q07878 FAT1YBR041W 2010 nt3.46□□□□□ -1.86
VPS13Q07878 DNF2YDR093W 4839 nt3.45□□□□□ -1.86
VPS13Q07878 VTC4YJL012C 2166 nt3.45□□□□□ -1.86
VPS13Q07878 ATG2YNL242W 4779 nt3.45□□□□□ -1.86
VPS13Q07878 TRS120YDR407C 3870 nt3.45□□□□□ -1.86
VPS13Q07878 YCR101CYCR101C 549 nt3.45□□□□□ -1.86
VPS13Q07878 RPS12YOR369C 432 nt3.45□□□□□ -1.86
VPS13Q07878 PMT2YAL023C 2280 nt3.45□□□□□ -1.86
VPS13Q07878 ERG2YMR202W 669 nt3.44□□□□□ -1.86
VPS13Q07878 FAA2YER015W 2235 nt3.44□□□□□ -1.86
VPS13Q07878 INN1YNL152W 1230 nt3.44□□□□□ -1.86
VPS13Q07878 TGL4YKR089C 2733 nt3.44□□□□□ -1.86
VPS13Q07878 HAL5YJL165C 2568 nt3.43□□□□□ -1.86
VPS13Q07878 CHL1YPL008W 2586 nt3.43□□□□□ -1.86
VPS13Q07878 RPL13AYDL082W 600 nt3.43□□□□□ -1.86
VPS13Q07878 RPL8AYHL033C 771 nt3.43□□□□□ -1.86
VPS13Q07878 ICY1YMR195W 384 nt3.43□□□□□ -1.86
VPS13Q07878 RAD2YGR258C 3096 nt3.43□□□□□ -1.86
VPS13Q07878 SUM1YDR310C 3189 nt3.43□□□□□ -1.86
VPS13Q07878 GOT1YMR292W 417 nt3.43□□□□□ -1.86
VPS13Q07878 CIN8YEL061C 3003 nt3.42□□□□□ -1.86
VPS13Q07878 SSB1YDL229W 1842 nt3.42□□□□□ -1.86
VPS13Q07878 YHR202WYHR202W 1809 nt3.42□□□□□ -1.86
VPS13Q07878 PRP40YKL012W 1752 nt3.42□□□□□ -1.86
VPS13Q07878 YEL045CYEL045C 426 nt3.42□□□□□ -1.86
VPS13Q07878 ECI1YLR284C 843 nt3.42□□□□□ -1.86
VPS13Q07878 MUP3YHL036W 1641 nt3.42□□□□□ -1.86
VPS13Q07878 SRP101YDR292C 1866 nt3.42□□□□□ -1.86
VPS13Q07878 HSP82YPL240C 2130 nt3.41□□□□□ -1.86
VPS13Q07878 ARO4YBR249C 1113 nt3.41□□□□□ -1.86
VPS13Q07878 GUS1YGL245W 2127 nt3.41□□□□□ -1.86
VPS13Q07878 IDS2YJL146W 1410 nt3.41□□□□□ -1.86
VPS13Q07878 BCP1YDR361C 852 nt3.41□□□□□ -1.86
VPS13Q07878 NMD5YJR132W 3147 nt3.41□□□□□ -1.86
VPS13Q07878 YHR214C-DYHR214C-D 294 nt3.4□□□□□ -1.86
VPS13Q07878 YLR125WYLR125W 411 nt3.4□□□□□ -1.86
VPS13Q07878 YAR069CYAR069C 294 nt3.4□□□□□ -1.86
VPS13Q07878 YBL059WYBL059W 582 nt3.4□□□□□ -1.86
VPS13Q07878 FSH3YOR280C 801 nt3.4□□□□□ -1.86
VPS13Q07878 YBR137WYBR137W 540 nt3.4□□□□□ -1.86
VPS13Q07878 SNQ2YDR011W 4506 nt3.4□□□□□ -1.87
VPS13Q07878 VTA1YLR181C 993 nt3.4□□□□□ -1.87
VPS13Q07878 RIM11YMR139W 1113 nt3.4□□□□□ -1.87
VPS13Q07878 RNT1YMR239C 1416 nt3.4□□□□□ -1.87
VPS13Q07878 PRP19YLL036C 1512 nt3.4□□□□□ -1.87
VPS13Q07878 CDC15YAR019C 2925 nt3.4□□□□□ -1.87
VPS13Q07878 RPB9YGL070C 369 nt3.39□□□□□ -1.87
VPS13Q07878 YRA2YKL214C 612 nt3.39□□□□□ -1.87
VPS13Q07878 CST6YIL036W 1764 nt3.39□□□□□ -1.87
VPS13Q07878 FRE8YLR047C 2061 nt3.39□□□□□ -1.87
VPS13Q07878 VBA1YMR088C 1689 nt3.39□□□□□ -1.87
VPS13Q07878 GPI19YDR437W 423 nt3.39□□□□□ -1.87
VPS13Q07878 IRC18YJL037W 675 nt3.39□□□□□ -1.87
VPS13Q07878 MRP21YBL090W 534 nt3.39□□□□□ -1.87
VPS13Q07878 YPL114WYPL114W 420 nt3.39□□□□□ -1.87
VPS13Q07878 snR43snR43 209 nt3.39□□□□□ -1.87
VPS13Q07878 SSA2YLL024C 1920 nt3.39□□□□□ -1.87
VPS13Q07878 GAT2YMR136W 1683 nt3.39□□□□□ -1.87
VPS13Q07878 SSM4YIL030C 3960 nt3.39□□□□□ -1.87
VPS13Q07878 YDR444WYDR444W 2064 nt3.38□□□□□ -1.87
VPS13Q07878 TAF1YGR274C 3201 nt3.38□□□□□ -1.87
VPS13Q07878 OLE1YGL055W 1533 nt3.38□□□□□ -1.87
VPS13Q07878 YMR317WYMR317W 3423 nt3.38□□□□□ -1.87
VPS13Q07878 CDC40YDR364C 1368 nt3.38□□□□□ -1.87
VPS13Q07878 RRN3YKL125W 1884 nt3.38□□□□□ -1.87
VPS13Q07878 TEL2YGR099W 2067 nt3.38□□□□□ -1.87
VPS13Q07878 PML39YML107C 1005 nt3.38□□□□□ -1.87
VPS13Q07878 HMG1YML075C 3165 nt3.38□□□□□ -1.87
VPS13Q07878 PAN1YIR006C 4443 nt3.38□□□□□ -1.87
VPS13Q07878 ERG26YGL001C 1050 nt3.37□□□□□ -1.87
VPS13Q07878 TIF4631YGR162W 2859 nt3.37□□□□□ -1.87
VPS13Q07878 SET5YHR207C 1581 nt3.37□□□□□ -1.87
VPS13Q07878 YPR003CYPR003C 2265 nt3.37□□□□□ -1.87
VPS13Q07878 PRE1YER012W 597 nt3.37□□□□□ -1.87
VPS13Q07878 MIG3YER028C 1185 nt3.37□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 15.5 ms