Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC30.53■■■□□ 2.48
COL16A1Q07092 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC30.52■■■□□ 2.48
COL16A1Q07092 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC30.52■■■□□ 2.48
COL16A1Q07092 RARA-203ENST00000394086 2008 ntTSL 2 BASIC30.52■■■□□ 2.48
COL16A1Q07092 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
COL16A1Q07092 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
COL16A1Q07092 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC30.51■■■□□ 2.48
COL16A1Q07092 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC30.51■■■□□ 2.48
COL16A1Q07092 AC142086.6-201ENST00000621154 1765 ntBASIC30.51■■■□□ 2.48
COL16A1Q07092 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC30.51■■■□□ 2.47
COL16A1Q07092 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
COL16A1Q07092 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC30.51■■■□□ 2.47
COL16A1Q07092 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
COL16A1Q07092 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC30.51■■■□□ 2.47
COL16A1Q07092 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC30.51■■■□□ 2.47
COL16A1Q07092 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
COL16A1Q07092 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC30.51■■■□□ 2.47
COL16A1Q07092 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC30.51■■■□□ 2.47
COL16A1Q07092 AL161729.1-201ENST00000604104 1402 ntBASIC30.5■■■□□ 2.47
COL16A1Q07092 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
COL16A1Q07092 AC133041.1-202ENST00000642053 222 ntBASIC30.5■■■□□ 2.47
COL16A1Q07092 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
COL16A1Q07092 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
COL16A1Q07092 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC30.49■■■□□ 2.47
COL16A1Q07092 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC30.49■■■□□ 2.47
COL16A1Q07092 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
COL16A1Q07092 KRT18P29-201ENST00000397031 1267 ntBASIC30.49■■■□□ 2.47
COL16A1Q07092 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
COL16A1Q07092 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC30.49■■■□□ 2.47
COL16A1Q07092 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC30.49■■■□□ 2.47
COL16A1Q07092 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
COL16A1Q07092 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
COL16A1Q07092 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
COL16A1Q07092 ALDH1A3-203ENST00000557963 1670 ntBASIC30.48■■■□□ 2.47
COL16A1Q07092 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC30.48■■■□□ 2.47
COL16A1Q07092 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC30.48■■■□□ 2.47
COL16A1Q07092 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
COL16A1Q07092 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC30.47■■■□□ 2.47
COL16A1Q07092 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
COL16A1Q07092 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
COL16A1Q07092 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC30.47■■■□□ 2.47
COL16A1Q07092 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC30.47■■■□□ 2.47
COL16A1Q07092 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC30.47■■■□□ 2.47
COL16A1Q07092 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
COL16A1Q07092 AC007322.1-201ENST00000426983 750 ntBASIC30.47■■■□□ 2.47
COL16A1Q07092 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC30.47■■■□□ 2.47
COL16A1Q07092 UBE2DNL-204ENST00000602536 740 ntBASIC30.47■■■□□ 2.47
COL16A1Q07092 CPT2-209ENST00000636935 803 ntTSL 5 BASIC30.47■■■□□ 2.47
COL16A1Q07092 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
COL16A1Q07092 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
COL16A1Q07092 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC30.47■■■□□ 2.47
COL16A1Q07092 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC30.46■■■□□ 2.47
COL16A1Q07092 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC30.46■■■□□ 2.47
COL16A1Q07092 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
COL16A1Q07092 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC30.46■■■□□ 2.47
COL16A1Q07092 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
COL16A1Q07092 SLC7A5P1-201ENST00000568957 537 ntBASIC30.46■■■□□ 2.47
COL16A1Q07092 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
COL16A1Q07092 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC30.45■■■□□ 2.47
COL16A1Q07092 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC30.45■■■□□ 2.47
COL16A1Q07092 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC30.45■■■□□ 2.47
COL16A1Q07092 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC30.45■■■□□ 2.46
COL16A1Q07092 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
COL16A1Q07092 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
COL16A1Q07092 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
COL16A1Q07092 STX4-202ENST00000394998 1498 ntTSL 2 BASIC30.44■■■□□ 2.46
COL16A1Q07092 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
COL16A1Q07092 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
COL16A1Q07092 EI24-204ENST00000527235 1625 ntTSL 5 BASIC30.44■■■□□ 2.46
COL16A1Q07092 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC30.44■■■□□ 2.46
COL16A1Q07092 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC30.44■■■□□ 2.46
COL16A1Q07092 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC30.43■■■□□ 2.46
COL16A1Q07092 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
COL16A1Q07092 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
COL16A1Q07092 SLC6A10P-202ENST00000431994 2058 ntBASIC30.43■■■□□ 2.46
COL16A1Q07092 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
COL16A1Q07092 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
COL16A1Q07092 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC30.43■■■□□ 2.46
COL16A1Q07092 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
COL16A1Q07092 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
COL16A1Q07092 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
COL16A1Q07092 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
COL16A1Q07092 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC30.42■■■□□ 2.46
COL16A1Q07092 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
COL16A1Q07092 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC30.42■■■□□ 2.46
COL16A1Q07092 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
COL16A1Q07092 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
COL16A1Q07092 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC30.42■■■□□ 2.46
COL16A1Q07092 GCSHP5-201ENST00000443090 522 ntBASIC30.42■■■□□ 2.46
COL16A1Q07092 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
COL16A1Q07092 RNA5SP413-201ENST00000516373 109 ntBASIC30.42■■■□□ 2.46
COL16A1Q07092 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
COL16A1Q07092 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
COL16A1Q07092 CNN2P6-201ENST00000439038 900 ntBASIC30.41■■■□□ 2.46
COL16A1Q07092 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
COL16A1Q07092 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC30.41■■■□□ 2.46
COL16A1Q07092 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC30.41■■■□□ 2.46
COL16A1Q07092 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
COL16A1Q07092 AL596275.1-201ENST00000423464 877 ntBASIC30.4■■■□□ 2.46
COL16A1Q07092 AC079140.4-201ENST00000507448 529 ntBASIC30.4■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms